RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 RPS6KA5O75582 802 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 IFNA8P32881 189 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 PLK1P53350 603 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 LLGL2Q6P1M3 1020 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 IRF2BP2Q7Z5L9 587 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 GPR141Q7Z602 305 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 MFN1Q8IWA4 741 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 RIN3Q8TB24 985 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 CALML6Q8TD86 181 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 SLC8A2Q9UPR5 921 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 ACOT9Q9Y305 439 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 FOXO6A8MYZ6 492 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 AP3B1O00203 1094 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 MYO1DO94832 1006 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 UNC5CO95185 931 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 STAG3L1P0CL83 205 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 MAPK10P53779 464 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 PKNOX1P55347 436 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 POU6F1Q14863 301 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 GALNTL6Q49A17 601 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 RRM2BQ7LG56 351 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 YTHDF3Q7Z739 585 aaKnown RBP13.98□□□□□ -0.17
TCF3-201ENST00000262965 MIB1Q86YT6 1006 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 MIER2Q8N344 545 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 EFCAB3Q8N7B9 438 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 TDRD5Q8NAT2 981 aaKnown RBP13.98□□□□□ -0.17
TCF3-201ENST00000262965 RDM1Q8NG50 284 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 ZSCAN18Q8TBC5 510 aaPredicted RBP13.98□□□□□ -0.17
TCF3-201ENST00000262965 GDPD5Q8WTR4 605 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 MIEF2Q96C03 454 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 CELF6Q96J87 481 aaKnown RBP13.98□□□□□ -0.17
TCF3-201ENST00000262965 MYOZ2Q9NPC6 264 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 NR5A2O00482 541 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 SPTLC1O15269 473 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 KRT36O76013 467 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 CD4P01730 458 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 CYP2F1P24903 491 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 PSMA4P25789 261 aaKnown RBP13.98□□□□□ -0.17
TCF3-201ENST00000262965 MYBPC2Q14324 1141 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 TRIM16LQ309B1 348 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 PTRHD1Q6GMV3 140 aaKnown RBP13.98□□□□□ -0.17
TCF3-201ENST00000262965 CHSY1Q86X52 802 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 P3H2Q8IVL5 708 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 USP6NLQ92738 828 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 ATXN3LQ9H3M9 355 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 PRG3Q9Y2Y8 225 aaPredicted RBP13.98□□□□□ -0.17
TCF3-201ENST00000262965 TIMM44O43615 452 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 AP1G2O75843 785 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 ZMPSTE24O75844 475 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 RAG1P15918 1043 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 GRK2P25098 689 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 MIPP30301 263 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 SLC1A6P48664 564 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 SERPINB8P50452 374 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 CRADDP78560 199 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 POU4F1Q01851 419 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 DDX39BQ13838 428 aaKnown RBP13.98□□□□□ -0.17
TCF3-201ENST00000262965 ZRANB3Q5FWF4 1079 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 DUPD1Q68J44 220 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 MPZL3Q6UWV2 235 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.98□□□□□ -0.172e-6■■■■□ 25.5
TCF3-201ENST00000262965 SCUBE3Q8IX30 993 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 TMEM176AQ96HP8 235 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 APOPT1Q96IL0 206 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 NAT9Q9BTE0 207 aa13.98□□□□□ -0.17
TCF3-201ENST00000262965 ASTN1O14525 1302 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 EME2A4GXA9 379 aaPredicted RBP13.97□□□□□ -0.17
TCF3-201ENST00000262965 HNRNPCL2B2RXH8 293 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 GH1P01241 217 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 KRT8P05787 483 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 AMPD1P23109 780 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 GCNT1Q02742 428 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 PDK2Q15119 407 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 OTUD3Q5T2D3 398 aaPredicted RBP13.97□□□□□ -0.17
TCF3-201ENST00000262965 SLFN11Q7Z7L1 901 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 RBM46Q8TBY0 533 aaKnown RBP13.97□□□□□ -0.17
TCF3-201ENST00000262965 ZNF518BQ9C0D4 1074 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 ERVK-5Q9HDB9 667 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 ZC4H2Q9NQZ6 224 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 FRMPD4Q14CM0 1322 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 NRXN3Q9Y4C0 1643 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 WDR27A2RRH5 827 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 ZNF197O14709 1029 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 B3GAT3O94766 335 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 RBL1P28749 1068 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 PTDSS1P48651 473 aaKnown RBP13.97□□□□□ -0.17
TCF3-201ENST00000262965 GMPSP49915 693 aaPredicted RBP13.97□□□□□ -0.17
TCF3-201ENST00000262965 PTK6Q13882 451 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 C4orf22Q6V702 233 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 KYQ8NBH2 561 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 TRAPPC12Q8WVT3 735 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 SH3KBP1Q96B97 665 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 TMEM79Q9BSE2 394 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 RNF181Q9P0P0 153 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 TSPAN16Q9UKR8 245 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 A0A087WZ62 844 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 ERI2A8K979 691 aaKnown RBP13.97□□□□□ -0.17
TCF3-201ENST00000262965 BAIAP3O94812 1187 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 TMCC1O94876 653 aa13.97□□□□□ -0.17
TCF3-201ENST00000262965 HIST1H2AGP0C0S8 130 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms