RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 RAB41Q5JT25 222 aa12.18□□□□□ -0.46
PFDN1-201ENST00000261813 C10orf76Q5T2E6 689 aa12.18□□□□□ -0.46
PFDN1-201ENST00000261813 PPP1R2P3Q6NXS1 205 aa12.18□□□□□ -0.46
PFDN1-201ENST00000261813 WDR59Q6PJI9 974 aa12.18□□□□□ -0.46
PFDN1-201ENST00000261813 NOP9Q86U38 636 aaKnown RBP12.18□□□□□ -0.46
PFDN1-201ENST00000261813 ZSCAN30Q86W11 494 aa12.18□□□□□ -0.46
PFDN1-201ENST00000261813 FAM160A2Q8N612 972 aaPredicted RBP12.18□□□□□ -0.46
PFDN1-201ENST00000261813 SLC35F5Q8WV83 523 aa12.18□□□□□ -0.46
PFDN1-201ENST00000261813 DDX1Q92499 740 aaKnown RBP12.18□□□□□ -0.46
PFDN1-201ENST00000261813 ACSF2Q96CM8 615 aaPredicted RBP12.18□□□□□ -0.46
PFDN1-201ENST00000261813 ZSWIM3Q96MP5 696 aa12.18□□□□□ -0.46
PFDN1-201ENST00000261813 NHEJ1Q9H9Q4 299 aaPredicted RBP12.18□□□□□ -0.46
PFDN1-201ENST00000261813 COMMD8Q9NX08 183 aa12.18□□□□□ -0.46
PFDN1-201ENST00000261813 EHD2Q9NZN4 543 aa12.18□□□□□ -0.46
PFDN1-201ENST00000261813 EPS15L1Q9UBC2 864 aa12.18□□□□□ -0.46
PFDN1-201ENST00000261813 PCDHGC3Q9UN70 934 aa12.18□□□□□ -0.46
PFDN1-201ENST00000261813 EPN1Q9Y6I3 576 aaPredicted RBP12.18□□□□□ -0.46
PFDN1-201ENST00000261813 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
PFDN1-201ENST00000261813 GOLGA6L9A6NEM1 432 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 DCXO43602 365 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 MSNP26038 577 aaKnown RBP12.17□□□□□ -0.46
PFDN1-201ENST00000261813 GPD2P43304 727 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 PGFP49763 221 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 RGS7P49802 495 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 PDE6CP51160 858 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 SLC8A3P57103 927 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 ARID5AQ03989 594 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 GOLGA8FQ08AF8 430 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 GOLGA8DPQ0D2H9 430 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 GPR158Q5T848 1215 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 PMF1Q6P1K2 205 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 TMEM139Q8IV31 216 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 PASD1Q8IV76 773 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 ZDHHC14Q8IZN3 488 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 ST13P5Q8NFI4 369 aaPredicted RBP12.17□□□□□ -0.46
PFDN1-201ENST00000261813 EPS8L1Q8TE68 723 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 KCTD13Q8WZ19 329 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 FBXO32Q969P5 355 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 ZNF830Q96NB3 372 aaPredicted RBP12.17□□□□□ -0.46
PFDN1-201ENST00000261813 GCNAQ96QF7 691 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 KCNH6Q9H252 994 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 KCNF1Q9H3M0 494 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 GDE1Q9NZC3 331 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 GMIPQ9P107 970 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 CYTH4Q9UIA0 394 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 NOCTQ9UK39 431 aaKnown RBP12.17□□□□□ -0.46
PFDN1-201ENST00000261813 USP3Q9Y6I4 520 aa12.17□□□□□ -0.46
PFDN1-201ENST00000261813 OBSL1O75147 1896 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 PIEZO1Q92508 2521 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 ZNF840PA6NDX5 716 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 EIF3CLB5ME19 914 aaKnown RBP12.16□□□□□ -0.46
PFDN1-201ENST00000261813 CCDC175P0C221 793 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 ZDHHC11BP0C7U3 371 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 TNFAIP3P21580 790 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 MSS51Q4VC12 460 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 ARHGAP15Q53QZ3 475 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 TAF3Q5VWG9 929 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 HGSNATQ68CP4 663 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 TXNDC8Q6A555 127 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 WDTC1Q8N5D0 677 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 SLC20A1Q8WUM9 679 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 MRPS31Q92665 395 aaKnown RBP12.16□□□□□ -0.46
PFDN1-201ENST00000261813 SLITRK1Q96PX8 696 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 EIF3CQ99613 913 aaKnown RBP12.16□□□□□ -0.46
PFDN1-201ENST00000261813 CHP1Q99653 195 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 SLC46A2Q9BY10 475 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 FBXO44Q9H4M3 255 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 HAUS4Q9H6D7 363 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 TASP1Q9H6P5 420 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 TRPM5Q9NZQ8 1165 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 ARHGAP20Q9P2F6 1191 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 LIMD1Q9UGP4 676 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 CHORDC1Q9UHD1 332 aaPredicted RBP12.16□□□□□ -0.46
PFDN1-201ENST00000261813 SCML2Q9UQR0 700 aa12.16□□□□□ -0.46
PFDN1-201ENST00000261813 ZFP37Q9Y6Q3 630 aaPredicted RBP12.16□□□□□ -0.46
PFDN1-201ENST00000261813 DOCK8Q8NF50 2099 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 NCANO14594 1321 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 C2orf78A6NCI8 922 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 ANHXE9PGG2 379 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 PIK3R2O00459 728 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 NDUFA10O95299 355 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 LCA5LO95447 670 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 MMEP08473 750 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 USP17L7P0C7H9 530 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 CHRNB2P17787 502 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 FCARP24071 287 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 EIF4A3P38919 411 aaKnown RBP12.15□□□□□ -0.46
PFDN1-201ENST00000261813 PPP3CCP48454 512 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 RPL34P49207 117 aaKnown RBP12.15□□□□□ -0.46
PFDN1-201ENST00000261813 TKTL1P51854 596 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 ADIGQ0VDE8 80 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 HTR4Q13639 388 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 SLC18A3Q16572 532 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 FAM78AQ5JUQ0 283 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 E4F1Q66K89 784 aaPredicted RBP12.15□□□□□ -0.46
PFDN1-201ENST00000261813 PARM1Q6UWI2 310 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 TRIM72Q6ZMU5 477 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 BHLHA9Q7RTU4 235 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 MAB21L3Q8N8X9 362 aa12.15□□□□□ -0.46
PFDN1-201ENST00000261813 C1orf131Q8NDD1 294 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms