RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 MRGPRX3Q96LB0 322 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 GUCD1Q96NT3 240 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 PARD6BQ9BYG5 372 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 LUC7LQ9NQ29 371 aaKnown RBP5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 CYLDQ9NQC7 956 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 ARMCX3Q9UH62 379 aaPredicted RBP5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 CABIN1Q9Y6J0 2220 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 A0A0A6YYK5 440 aaPredicted RBP5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 K7ERI5 159 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 HMGB3O15347 200 aaKnown RBP5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 GRAP2O75791 330 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 PRLRP16471 622 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 ADRA1AP35348 466 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 ARCN1P48444 511 aaKnown RBP5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 CLCN4P51793 760 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 ACAD10Q6JQN1 1059 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 ATAD1Q8NBU5 361 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 DENND1AQ8TEH3 1009 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 NUDT8Q8WV74 236 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 HVCN1Q96D96 273 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 SLITRK1Q96PX8 696 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 DNPEPQ9ULA0 475 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 TNPO2O14787 897 aaKnown RBP5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 DLATP10515 647 aaKnown RBP5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 TPD52L1Q16890 204 aaPredicted RBP5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 RNF111Q6ZNA4 994 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 SPPL3Q8TCT6 385 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 SLC2A14Q8TDB8 520 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 CCDC12Q8WUD4 166 aaPredicted RBP5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 NLRP7Q8WX94 980 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 KCTD15Q96SI1 283 aaPredicted RBP5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 MENTQ9BUN1 341 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 NAT10Q9H0A0 1025 aaKnown RBP5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 ZNF395Q9H8N7 513 aaPredicted RBP5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 KIF9Q9HAQ2 790 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 TMOD2Q9NZR1 351 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 B4DXG7 233 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 MSI1O43347 362 aaKnown RBP5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 MT-CO1P00395 513 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 CNPP09543 421 aaKnown RBP5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 RARGP13631 454 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 SFPQP23246 707 aaKnown RBP eCLIP5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 PSMC2P35998 433 aaKnown RBP5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 NTHL1P78549 312 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 MRPS5P82675 430 aaKnown RBP5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 CEP57L1Q8IYX8 460 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 ARRDC2Q8TBH0 407 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 TTLL2Q9BWV7 592 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 DACH1Q9UI36 760 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 IGF2RP11717 2491 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 hCG_1818297A0A087WSY0 165 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 LRRIQ4A6NIV6 560 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 ASB14A6NK59 587 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 VSTM1Q6UX27 236 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 ARCQ7LC44 396 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 MAML1Q92585 1016 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 SUSD3Q96L08 255 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 TRIM51Q9BSJ1 452 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 TSEN34Q9BSV6 310 aaKnown RBP5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 EDEM3Q9BZQ6 932 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 CCSER2Q9H7U1 834 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 NARSO43776 548 aaKnown RBP5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 RFPL2O75678 378 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 JUNP05412 331 aaKnown RBP5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 TMEM253P0C7T8 217 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 SYN1P17600 705 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 RGS2P41220 211 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 TUBB3Q13509 450 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 SMTNL2Q2TAL5 461 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 WDR93Q6P2C0 686 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 PIGZQ86VD9 579 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 ZNF410Q86VK4 478 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 GPR150Q8NGU9 434 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 INSM2Q96T92 566 aaPredicted RBP5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 HNRNPABQ99729 332 aaKnown RBP5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 GTPBP4Q9BZE4 634 aaKnown RBP5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 ZNHIT6Q9NWK9 470 aaKnown RBP5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 MED13Q9UHV7 2174 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 HEATR5AQ86XA9 2040 aa5.95□□□□□ -1.46
TOPBP1-201ENST00000260810 HNRNPDLO14979 420 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 TXLNAP40222 546 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 ETV4P43268 484 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 KCNQ1P51787 676 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 KCTD2Q14681 263 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 ZNF397Q8NF99 534 aaPredicted RBP5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 OR2W6PQ8NHA6 318 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 BADQ92934 168 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 LRCH3Q96II8 777 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 TRIM5Q9C035 493 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 CLEC11AQ9Y240 323 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 TRIM17Q9Y577 477 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 FRAS1Q86XX4 4008 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 MTMR11A4FU01 709 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 MYO1FO00160 1098 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 GAP43P17677 238 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 CXCR3P49682 368 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 MIS18BP1Q6P0N0 1132 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 SFTPA2Q8IWL1 248 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 BMPERQ8N8U9 685 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 SLC45A3Q96JT2 553 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms