RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 SLC35F5Q8WV83 523 aa8.97□□□□□ -0.97
TMEM258-201ENST00000257262 SHC3Q92529 594 aa8.97□□□□□ -0.97
TMEM258-201ENST00000257262 SECISBP2LQ93073 1101 aaKnown RBP8.97□□□□□ -0.97
TMEM258-201ENST00000257262 SHDQ96IW2 340 aa8.97□□□□□ -0.97
TMEM258-201ENST00000257262 ZFRQ96KR1 1074 aaKnown RBP8.97□□□□□ -0.97
TMEM258-201ENST00000257262 FAM83CQ9BQN1 747 aa8.97□□□□□ -0.97
TMEM258-201ENST00000257262 DDX23Q9BUQ8 820 aaKnown RBP8.97□□□□□ -0.97
TMEM258-201ENST00000257262 LINC00597Q9H2U6 94 aa8.97□□□□□ -0.97
TMEM258-201ENST00000257262 EBF3Q9H4W6 596 aa8.97□□□□□ -0.97
TMEM258-201ENST00000257262 TBC1D17Q9HA65 648 aa8.97□□□□□ -0.97
TMEM258-201ENST00000257262 LRRC4Q9HBW1 653 aa8.97□□□□□ -0.97
TMEM258-201ENST00000257262 SMPD4Q9NXE4 827 aa8.97□□□□□ -0.97
TMEM258-201ENST00000257262 NUDT5Q9UKK9 219 aa8.97□□□□□ -0.97
TMEM258-201ENST00000257262 MTF2Q9Y483 593 aaPredicted RBP8.97□□□□□ -0.97
TMEM258-201ENST00000257262 NCOR1O75376 2440 aa8.97□□□□□ -0.97
TMEM258-201ENST00000257262 M0QYV0 167 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 PIK3R2O00459 728 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 THAP12O43422 761 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 MED7O43513 233 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 TLR5O60602 858 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 ZBED1O96006 694 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 PNMA6AP0CW24 399 aaPredicted RBP8.96□□□□□ -0.98
TMEM258-201ENST00000257262 SETSIPP0DME0 302 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 RARGP13631 454 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 ATP1A3P13637 1013 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 LCP1P13796 627 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 RFX1P22670 979 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 CLCN1P35523 988 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 ATP5C1P36542 298 aaKnown RBP8.96□□□□□ -0.98
TMEM258-201ENST00000257262 GPD2P43304 727 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 SOX9P48436 509 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 RGS7P49802 495 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 TUBP50607 506 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 KPNA1P52294 538 aaPredicted RBP8.96□□□□□ -0.98
TMEM258-201ENST00000257262 MLLT6P55198 1093 aaPredicted RBP8.96□□□□□ -0.98
TMEM258-201ENST00000257262 USP4Q13107 963 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 RUNX3Q13761 415 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 RAPGEF1Q13905 1077 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 UBXN2BQ14CS0 331 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 IQCB1Q15051 598 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 PM20D1Q6GTS8 502 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 PMF1Q6P1K2 205 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 DENND1BQ6P3S1 775 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 ZNF852Q6ZMS4 543 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 APTXQ7Z2E3 356 aaKnown RBP8.96□□□□□ -0.98
TMEM258-201ENST00000257262 CCDC186Q7Z3E2 898 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 OSCP1Q8WVF1 389 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 KCTD13Q8WZ19 329 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 FAM3CQ92520 227 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 NDRG1Q92597 394 aaKnown RBP8.96□□□□□ -0.98
TMEM258-201ENST00000257262 LSM14BQ9BX40 385 aaKnown RBP8.96□□□□□ -0.98
TMEM258-201ENST00000257262 NAA15Q9BXJ9 866 aaKnown RBP8.96□□□□□ -0.98
TMEM258-201ENST00000257262 ULBP1Q9BZM6 244 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 FOXQ1Q9C009 403 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 NACA2Q9H009 215 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 CYLDQ9NQC7 956 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 HPS4Q9NQG7 708 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.96□□□□□ -0.98
TMEM258-201ENST00000257262 DUS2Q9NX74 493 aaKnown RBP8.96□□□□□ -0.98
TMEM258-201ENST00000257262 NAGPAQ9UK23 515 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 SIT1Q9Y3P8 196 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 FHOD1Q9Y613 1164 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 WNT6Q9Y6F9 365 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 PIAS3Q9Y6X2 628 aa8.96□□□□□ -0.98
TMEM258-201ENST00000257262 OTOL1A6NHN0 477 aaPredicted RBP8.95□□□□□ -0.98
TMEM258-201ENST00000257262 FAM170BA6NMN3 283 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 SPECC1L-ADORA2AF8WAN1 911 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 MAN2B1O00754 1011 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 MDM4O15151 490 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 DCNP07585 359 aaKnown RBP8.95□□□□□ -0.98
TMEM258-201ENST00000257262 GLULP15104 373 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 ARSAP15289 507 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 UCHL3P15374 230 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 IFNAR2P48551 515 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 YWHAGP61981 247 aaKnown RBP eCLIP8.95□□□□□ -0.98
TMEM258-201ENST00000257262 UBXN1Q04323 297 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 PTK2Q05397 1052 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 ADIGQ0VDE8 80 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 DRAP1Q14919 205 aaPredicted RBP8.95□□□□□ -0.98
TMEM258-201ENST00000257262 PDGFRLQ15198 375 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 ITPRIPL2Q3MIP1 535 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 ZSCAN23Q3MJ62 389 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 BHLHA9Q7RTU4 235 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 SLC47A2Q86VL8 602 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 FAM71AQ8IYT1 594 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 ADGRG2Q8IZP9 1017 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 SIX6OS1Q8N1H7 587 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 ZNF276Q8N554 614 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 PJA1Q8NG27 643 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 WBP2Q969T9 261 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 HSFY1Q96LI6 401 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 NELL2Q99435 816 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 KLF16Q9BXK1 252 aaPredicted RBP8.95□□□□□ -0.98
TMEM258-201ENST00000257262 STK33Q9BYT3 514 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 GANQ9H2C0 597 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 C8orf33Q9H7E9 229 aaPredicted RBP8.95□□□□□ -0.98
TMEM258-201ENST00000257262 LTB4R2Q9NPC1 389 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 PLCB1Q9NQ66 1216 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 CLIC5Q9NZA1 410 aa8.95□□□□□ -0.98
TMEM258-201ENST00000257262 CFAP97Q9P2B7 532 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms