RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 ABLIM3O94929 683 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 ATF2P15336 505 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 GJC1P36383 396 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 PEX5P50542 639 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 DLX2Q07687 328 aaPredicted RBP12.68□□□□□ -0.38
NIP7-201ENST00000254940 ZNF252P-AS1Q0IIN9 211 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 BST2Q10589 180 aaKnown RBP12.68□□□□□ -0.38
NIP7-201ENST00000254940 HYAL1Q12794 435 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 DEFB123Q8N688 67 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 EMC1Q8N766 993 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 HNRNPLLQ8WVV9 542 aaKnown RBP12.68□□□□□ -0.38
NIP7-201ENST00000254940 MRPL38Q96DV4 380 aaKnown RBP12.68□□□□□ -0.38
NIP7-201ENST00000254940 RXFP1Q9HBX9 757 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 ADAM22Q9P0K1 906 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 TTI1O43156 1089 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 HAPLN1P10915 354 aaPredicted RBP12.68□□□□□ -0.38
NIP7-201ENST00000254940 TKTL1P51854 596 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 BCAT1P54687 386 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 FAM193AP78312 1265 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 CENPCQ03188 943 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 UBE3AQ05086 875 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 NFE2Q16621 373 aaPredicted RBP12.68□□□□□ -0.38
NIP7-201ENST00000254940 PKDCCQ504Y2 493 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 OR6B2Q6IFH4 312 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 HFE2Q6ZVN8 426 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 KRT222Q8N1A0 295 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 TTC39CQ8N584 583 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 ACTRT1Q8TDG2 376 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 SELENOOQ9BVL4 669 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 AFF4Q9UHB7 1163 aaKnown RBP12.68□□□□□ -0.38
NIP7-201ENST00000254940 USTQ9Y2C2 406 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 INSL5Q9Y5Q6 135 aa12.68□□□□□ -0.38
NIP7-201ENST00000254940 SCAMP3O14828 347 aaKnown RBP12.67□□□□□ -0.38
NIP7-201ENST00000254940 SLC5A3P53794 718 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 MAMLD1Q13495 774 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 SKIV2LQ15477 1246 aaKnown RBP12.67□□□□□ -0.38
NIP7-201ENST00000254940 SH3PXD2AQ5TCZ1 1133 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 FAM183BPQ6ZVS7 135 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 ERICH1Q86X53 443 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 TMEM35BQ8NCS4 154 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 SLC35F5Q8WV83 523 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 CASKIN2Q8WXE0 1202 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 EDEM1Q92611 657 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 CD101Q93033 1021 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 FAXDC2Q96IV6 333 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 PBKQ96KB5 322 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 ULBP1Q9BZM6 244 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 DMAP1Q9NPF5 467 aaPredicted RBP12.67□□□□□ -0.38
NIP7-201ENST00000254940 MTCH2Q9Y6C9 303 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 MTCL1Q9Y4B5 1905 aaKnown RBP12.67□□□□□ -0.38
NIP7-201ENST00000254940 SYNJ2BP-COX16A0A087WUM0 186 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 TARSL2A2RTX5 802 aaKnown RBP12.67□□□□□ -0.38
NIP7-201ENST00000254940 HHLA1C9JL84 531 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 GLP2RO95838 553 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 TAS2R40P59535 323 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 ITIH3Q06033 890 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 LIN9Q5TKA1 542 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 LILRA6Q6PI73 481 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 SND1Q7KZF4 910 aaKnown RBP eCLIP12.67□□□□□ -0.389e-8■■■□□ 16.1
NIP7-201ENST00000254940 RASGEF1CQ8N431 466 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 JOSD2Q8TAC2 188 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 C18orf8Q96DM3 657 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 CDX2Q99626 313 aaPredicted RBP12.67□□□□□ -0.38
NIP7-201ENST00000254940 CORO1BQ9BR76 489 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 TRIM51Q9BSJ1 452 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 NEUROG2Q9H2A3 272 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 LRRC4Q9HBW1 653 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.67□□□□□ -0.38
NIP7-201ENST00000254940 COX16Q9P0S2 106 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 FNIP2Q9P278 1114 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 CEP83Q9Y592 693 aa12.67□□□□□ -0.38
NIP7-201ENST00000254940 GREB1Q4ZG55 1949 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 ERLIN1O75477 346 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 PAX3P23760 479 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 MAPRE1Q15691 268 aaKnown RBP12.66□□□□□ -0.38
NIP7-201ENST00000254940 TAF12Q16514 161 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 PPM1LQ5SGD2 360 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 RARS2Q5T160 578 aaKnown RBP12.66□□□□□ -0.38
NIP7-201ENST00000254940 TSEN2Q8NCE0 465 aaKnown RBP12.66□□□□□ -0.38
NIP7-201ENST00000254940 ADAM32Q8TC27 787 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 ING5Q8WYH8 240 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 MAGEB5Q9BZ81 275 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 ZNF334Q9HCZ1 680 aaPredicted RBP12.66□□□□□ -0.38
NIP7-201ENST00000254940 CLDND1Q9NY35 253 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 KIAA1257Q9ULG3 409 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 PCDHGC3Q9UN70 934 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 SLC38A8A6NNN8 435 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 H3BQ06 376 aaPredicted RBP12.66□□□□□ -0.38
NIP7-201ENST00000254940 MDM4O15151 490 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 PAPSS1O43252 624 aaPredicted RBP12.66□□□□□ -0.38
NIP7-201ENST00000254940 MYL4P12829 197 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 FLT3P36888 993 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 SSR1P43307 286 aaKnown RBP12.66□□□□□ -0.38
NIP7-201ENST00000254940 ALDH1A3P47895 512 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 KCNJ1P48048 391 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 ADCY2Q08462 1091 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 DUSP6Q16828 381 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 STXBP5Q5T5C0 1151 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 TRNP1Q6NT89 227 aa12.66□□□□□ -0.38
NIP7-201ENST00000254940 C11orf63Q6NUN7 778 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms