RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 NIPA1Q7RTP0 329 aa18.16■□□□□ 0.5
NDFIP1-201ENST00000253814 SIK2Q9H0K1 926 aa18.16■□□□□ 0.5
NDFIP1-201ENST00000253814 ZNF212Q9UDV6 495 aa18.16■□□□□ 0.5
NDFIP1-201ENST00000253814 TJP2Q9UDY2 1190 aa18.16■□□□□ 0.5
NDFIP1-201ENST00000253814 E5RJQ4 531 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 TBX10O75333 385 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 RALBP11234 206 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 ANPEPP15144 967 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 DCAF6Q58WW2 860 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 NBPF12Q5TAG4 269 aaPredicted RBP18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 BBS12Q6ZW61 710 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 DDX18Q9NVP1 670 aaKnown RBP18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 ARHGAP26Q9UNA1 814 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 GOLGA8TH3BQL2 631 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 TMEM63AO94886 807 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 GSTT1P30711 240 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 SLC1A6P48664 564 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 TBL3Q12788 808 aaKnown RBP18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 PDPK2PQ6A1A2 396 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 BRSK2Q8IWQ3 736 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 ULK2Q8IYT8 1036 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 GDPD5Q8WTR4 605 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 GCOM2Q9BZD3 368 aaPredicted RBP18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 ACSS2Q9NR19 701 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 CLIC5Q9NZA1 410 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 GIPC1O14908 333 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 LRCH4O75427 683 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 WFS1O76024 890 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 ESRRGP62508 458 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 TMEM259Q4ZIN3 620 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 ZC3H12AQ5D1E8 599 aaKnown RBP18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 SNRNP27Q8WVK2 155 aaKnown RBP18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 SERAC1Q96JX3 654 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 FAM96AQ9H5X1 160 aa18.15■□□□□ 0.5
NDFIP1-201ENST00000253814 APOEP02649 317 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 C4BPAP04003 597 aaKnown RBP18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 EIF4BP23588 611 aaKnown RBP18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 EEF1B2P24534 225 aaKnown RBP18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 MLH1P40692 756 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 SLC12A1Q13621 1099 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 MSS51Q4VC12 460 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 EFHC2Q5JST6 749 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 PDZD8Q8NEN9 1154 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 TMEM176AQ96HP8 235 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 CPB2Q96IY4 423 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 IL1RAPL1Q9NZN1 696 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 COQ4Q9Y3A0 265 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 MRPL42Q9Y6G3 142 aaKnown RBP18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 MICAL2O94851 1124 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 RAG1P15918 1043 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 AVPR1AP37288 418 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 PHACTR1Q9C0D0 580 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 KLHL4Q9C0H6 718 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 TSPAN16Q9UKR8 245 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 NPTXRO95502 500 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 MT-CO1P00395 513 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 TXNP10599 105 aaKnown RBP18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 MMP14P50281 582 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 STX1BP61266 288 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 USP10Q14694 798 aaKnown RBP18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 KIF19Q2TAC6 998 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 IER5Q5VY09 327 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 LPCAT4Q643R3 524 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 JADE1Q6IE81 842 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 LCA5Q86VQ0 697 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 SH3TC2Q8TF17 1288 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 WDR60Q8WVS4 1066 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 UBP1Q9NZI7 540 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 ATP8B3O60423 1300 aa18.14■□□□□ 0.49
NDFIP1-201ENST00000253814 WNT10BO00744 389 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 CYP1A1P04798 512 aaPredicted RBP18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 POLBP06746 335 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 CCNB1P14635 433 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 LAMTOR4Q0VGL1 99 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 HABP4Q5JVS0 413 aaKnown RBP18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 RHBDF2Q6PJF5 856 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 MICALL2Q8IY33 904 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 CPXM1Q96SM3 734 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 EFHD1Q9BUP0 239 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 THAP1Q9NVV9 213 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 KCNK4Q9NYG8 393 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 CCDC88AQ3V6T2 1871 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 RNF103-CHMP3A0A140T963 221 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 KCNK1O00180 336 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 TPST1O60507 370 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 IVDP26440 423 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 SULT1E1P49888 294 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 HSD17B4P51659 736 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 RBP5P82980 135 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 PEX6Q13608 980 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 LY6KQ17RY6 165 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 GALNTL6Q49A17 601 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 LRRC38Q5VT99 294 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 TFAP2BQ92481 460 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 DDX1Q92499 740 aaKnown RBP18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 PPP2R3CQ969Q6 453 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 RNPEPQ9H4A4 650 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 XPNPEP1Q9NQW7 623 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 AURKCQ9UQB9 309 aa18.13■□□□□ 0.49
NDFIP1-201ENST00000253814 ZNF711Q9Y462 761 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms