RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.42□□□□□ -0.42
USHBP1-201ENST00000252597 WDTC1Q8N5D0 677 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 NAT8LQ8N9F0 302 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 PANX3Q96QZ0 392 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 CGRRF1Q99675 332 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 FOXP3Q9BZS1 431 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 PHACTR1Q9C0D0 580 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 KRT82Q9NSB4 513 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 PNPOQ9NVS9 261 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 EURLQ9NYK6 297 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 APPL1Q9UKG1 709 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 BRCA2P51587 3418 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 DCXO43602 365 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 LYNP07948 512 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 CSH1P0DML2 217 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 CSH2P0DML3 217 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 MCL1Q07820 350 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 USP4Q13107 963 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 TTC39BQ5VTQ0 682 aaPredicted RBP12.42□□□□□ -0.42
USHBP1-201ENST00000252597 NCAPG2Q86XI2 1143 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 SCUBE3Q8IX30 993 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 DEFB107AQ8IZN7 70 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 SAMD3Q8N6K7 520 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 APOL2Q9BQE5 337 aa12.42□□□□□ -0.42
USHBP1-201ENST00000252597 MAGEB2O15479 319 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 PEX1O43933 1283 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 ADCY3O60266 1144 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 KRT38O76015 456 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 ERBB2P04626 1255 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 PTGER2P43116 358 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 SP2Q02086 613 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 CTC1Q2NKJ3 1217 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 FASTKD1Q53R41 847 aaKnown RBP12.41□□□□□ -0.42
USHBP1-201ENST00000252597 SPATA24Q86W54 205 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 HPS6Q86YV9 775 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 TMPRSS6Q8IU80 811 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 TTC13Q8NBP0 860 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 SLC35B2Q8TB61 432 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 USP13Q92995 863 aaPredicted RBP12.41□□□□□ -0.42
USHBP1-201ENST00000252597 MARK4Q96L34 752 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 PHF12Q96QT6 1004 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 TWNKQ96RR1 684 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 WRNIP1Q96S55 665 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 C20orf27Q9GZN8 174 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 KLC2Q9H0B6 622 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 KCNK13Q9HB14 408 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 CYTH4Q9UIA0 394 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 PLA2G4CQ9UP65 541 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 TNS1Q9HBL0 1735 aaKnown RBP12.41□□□□□ -0.42
USHBP1-201ENST00000252597 ITM2AO43736 263 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 ZC3H11AO75152 810 aaKnown RBP eCLIP12.41□□□□□ -0.42
USHBP1-201ENST00000252597 OR6B1O95007 311 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 RTP1P59025 263 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 PTP4A2Q12974 167 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 MED21Q13503 144 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 OLIG2Q13516 323 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 ALKBH8Q96BT7 664 aaKnown RBP12.41□□□□□ -0.42
USHBP1-201ENST00000252597 ANKRD36BP1Q96IX9 119 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 LPIN3Q9BQK8 851 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 B3GNT5Q9BYG0 378 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 SLC38A10Q9HBR0 1119 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 PICK1Q9NRD5 415 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 RHBDL2Q9NX52 303 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 LAMA3Q16787 3333 aa12.41□□□□□ -0.42
USHBP1-201ENST00000252597 DKC1O60832 514 aaKnown RBP eCLIP12.4□□□□□ -0.42
USHBP1-201ENST00000252597 PRKCBP05771 671 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 PEX2P28328 305 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 CLCN3P51790 818 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 ITGA9Q13797 1035 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 CAPSQ13938 189 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 CYTH1Q15438 398 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 N4BP2L1Q5TBK1 243 aaPredicted RBP12.4□□□□□ -0.42
USHBP1-201ENST00000252597 CWF19L1Q69YN2 538 aaKnown RBP12.4□□□□□ -0.42
USHBP1-201ENST00000252597 VSIG10LQ86VR7 867 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 ARFGAP1Q8N6T3 406 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 CEP70Q8NHQ1 597 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 NKD2Q969F2 451 aaPredicted RBP12.4□□□□□ -0.42
USHBP1-201ENST00000252597 FBXL18Q96ME1 805 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 TUBB6Q9BUF5 446 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 XAB2Q9HCS7 855 aaKnown RBP12.4□□□□□ -0.42
USHBP1-201ENST00000252597 ARHGAP28Q9P2N2 729 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 TAGLN3Q9UI15 199 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 WDR27A2RRH5 827 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 LDHAP00338 332 aaKnown RBP12.4□□□□□ -0.42
USHBP1-201ENST00000252597 RARBP10826 455 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 TYK2P29597 1187 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 AP1B1Q10567 949 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 PRKD1Q15139 912 aaPredicted RBP12.4□□□□□ -0.42
USHBP1-201ENST00000252597 TCEAL1Q15170 157 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 NBPF12Q5TAG4 269 aaPredicted RBP12.4□□□□□ -0.42
USHBP1-201ENST00000252597 EEF1DP3Q658K8 133 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 CMC1Q7Z7K0 106 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 ST13P4Q8IZP2 240 aaPredicted RBP12.4□□□□□ -0.42
USHBP1-201ENST00000252597 DCLK2Q8N568 766 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 PTCD3Q96EY7 689 aaKnown RBP12.4□□□□□ -0.42
USHBP1-201ENST00000252597 CNBD2Q96M20 576 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 ETAA1Q9NY74 926 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 STX18Q9P2W9 335 aaKnown RBP12.4□□□□□ -0.42
USHBP1-201ENST00000252597 DRG1Q9Y295 367 aaKnown RBP12.4□□□□□ -0.42
USHBP1-201ENST00000252597 CNTNAP2Q9UHC6 1331 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms