RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 KCNJ18B7U540 433 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 TRAK2O60296 914 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 PIGRP01833 764 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 CDK4P11802 303 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 ANXA13P27216 316 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 PCSK1P29120 753 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 ACTN2P35609 894 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 TPMTP51580 245 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 NCKAP1LP55160 1127 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 STARD3Q14849 445 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 TEAD4Q15561 434 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 PKDCCQ504Y2 493 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 HES3Q5TGS1 186 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 SASS6Q6UVJ0 657 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 VSTM1Q6UX27 236 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 C4orf50Q6ZRC1 276 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 USP49Q70CQ1 688 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 KCNK18Q7Z418 384 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 ERICH1Q86X53 443 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 TMEM25Q86YD3 366 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 KRI1Q8N9T8 703 aaKnown RBP12.74□□□□□ -0.37
RFPL3-201ENST00000249007 SNX19Q92543 992 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 IGSF8Q969P0 613 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 CEP295NLQ96MC4 621 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 TTLL2Q9BWV7 592 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 ITM2CQ9NQX7 267 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 LARSQ9P2J5 1176 aaKnown RBP12.74□□□□□ -0.37
RFPL3-201ENST00000249007 ANKRD6Q9Y2G4 727 aa12.74□□□□□ -0.37
RFPL3-201ENST00000249007 USP9YO00507 2555 aaPredicted RBP12.74□□□□□ -0.37
RFPL3-201ENST00000249007 ANKRD17O75179 2603 aaKnown RBP12.73□□□□□ -0.37
RFPL3-201ENST00000249007 WASH3PC4AMC7 463 aa12.73□□□□□ -0.37
RFPL3-201ENST00000249007 GFRA2O00451 464 aa12.73□□□□□ -0.37
RFPL3-201ENST00000249007 KCNK3O14649 394 aa12.73□□□□□ -0.37
RFPL3-201ENST00000249007 HCRTO43612 131 aa12.73□□□□□ -0.37
RFPL3-201ENST00000249007 RFPL3O75679 317 aa12.73□□□□□ -0.37
RFPL3-201ENST00000249007 REC8O95072 547 aa12.73□□□□□ -0.37
RFPL3-201ENST00000249007 OXTRP30559 389 aa12.73□□□□□ -0.37
RFPL3-201ENST00000249007 TMPRSS3P57727 454 aa12.73□□□□□ -0.37
RFPL3-201ENST00000249007 TBC1D25Q3MII6 688 aa12.73□□□□□ -0.37
RFPL3-201ENST00000249007 FUT11Q495W5 492 aa12.73□□□□□ -0.37
RFPL3-201ENST00000249007 ARHGAP40Q5TG30 622 aa12.73□□□□□ -0.37
RFPL3-201ENST00000249007 KRT79Q5XKE5 535 aa12.73□□□□□ -0.37
RFPL3-201ENST00000249007 PRICKLE2Q7Z3G6 844 aa12.73□□□□□ -0.37
RFPL3-201ENST00000249007 SKAP1Q86WV1 359 aa12.73□□□□□ -0.37
RFPL3-201ENST00000249007 BBS7Q8IWZ6 715 aa12.73□□□□□ -0.37
RFPL3-201ENST00000249007 ZFRQ96KR1 1074 aaKnown RBP12.73□□□□□ -0.37
RFPL3-201ENST00000249007 RAB34Q9BZG1 259 aa12.73□□□□□ -0.37
RFPL3-201ENST00000249007 TM6SF1Q9BZW5 370 aa12.73□□□□□ -0.37
RFPL3-201ENST00000249007 MKRN2Q9H000 416 aaKnown RBP12.73□□□□□ -0.37
RFPL3-201ENST00000249007 SH3BP1Q9Y3L3 701 aa12.73□□□□□ -0.37
RFPL3-201ENST00000249007 SLCO1B1Q9Y6L6 691 aa12.73□□□□□ -0.37
RFPL3-201ENST00000249007 PP2D1A8MPX8 630 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 PRRT4C9JH25 899 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 H0Y8X5 98 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 TRIM66O15016 1216 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 C1SP09871 688 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 BDNFP23560 247 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 POLR2BP30876 1174 aaKnown RBP12.72□□□□□ -0.37
RFPL3-201ENST00000249007 LHX1P48742 406 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 UCNP55089 124 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 NOP14P78316 857 aaKnown RBP12.72□□□□□ -0.37
RFPL3-201ENST00000249007 IL9RQ01113 521 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 TAF10Q12962 218 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 BROXQ5VW32 411 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 SLC39A4Q6P5W5 647 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 FAM171BQ6P995 826 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 OSTM1Q86WC4 334 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 CREBRFQ8IUR6 639 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 ADGRF2Q8IZF7 708 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 IGSF22Q8N9C0 903 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 KCNN1Q92952 543 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 MYLPFQ96A32 169 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 MED8Q96G25 268 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 SLITRK1Q96PX8 696 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 NUP58Q9BVL2 599 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 CPNE5Q9HCH3 593 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 MAGEC2Q9UBF1 373 aaPredicted RBP12.72□□□□□ -0.37
RFPL3-201ENST00000249007 NXF1Q9UBU9 619 aaKnown RBP12.72□□□□□ -0.37
RFPL3-201ENST00000249007 NEDD8-MDP1E9PL57 170 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 ENC1O14682 589 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 CACNG3O60359 315 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 ATP2C2O75185 946 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 GRIA4P48058 902 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 HMGN5P82970 282 aaKnown RBP12.72□□□□□ -0.37
RFPL3-201ENST00000249007 DNAJC3Q13217 504 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 TTC38Q5R3I4 469 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 ADALQ6DHV7 355 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 ZNF248Q8NDW4 579 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 NAF1Q96HR8 494 aaKnown RBP12.72□□□□□ -0.37
RFPL3-201ENST00000249007 XPO6Q96QU8 1125 aaKnown RBP12.72□□□□□ -0.37
RFPL3-201ENST00000249007 PCED1AQ9H1Q7 454 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 UPF2Q9HAU5 1272 aaKnown RBP12.72□□□□□ -0.37
RFPL3-201ENST00000249007 IL17BQ9UHF5 180 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 NOL7Q9UMY1 257 aaKnown RBP12.72□□□□□ -0.37
RFPL3-201ENST00000249007 AGAP1Q9UPQ3 857 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 SNX9Q9Y5X1 595 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 NBASA2RRP1 2371 aa12.72□□□□□ -0.37
RFPL3-201ENST00000249007 K7ENM7 598 aa12.71□□□□□ -0.38
RFPL3-201ENST00000249007 CBX4O00257 560 aa12.71□□□□□ -0.38
RFPL3-201ENST00000249007 LAD1O00515 517 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms