RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 ARHGEF35A5YM69 484 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 TGDSO95455 350 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 GTF2IP78347 998 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 MCOLN2Q8IZK6 566 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 MARVELD2Q8N4S9 558 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 LINC00116Q8NCU8 138 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 PLEKHO2Q8TD55 490 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 DCPSQ96C86 337 aaKnown RBP18.94■□□□□ 0.62
PTPN12-201ENST00000248594 PPP1R14BQ96C90 147 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 PCDHAC2Q9Y5I4 1007 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 SIN3BO75182 1162 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 SERPINA6P08185 405 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 NDST2P52849 883 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 QRICH1Q2TAL8 776 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 PDPK2PQ6A1A2 396 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 FBXO33Q7Z6M2 555 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 BHLHE22Q8NFJ8 381 aaPredicted RBP18.94■□□□□ 0.62
PTPN12-201ENST00000248594 HPS1Q92902 700 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 CLIP3Q96DZ5 547 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 TMA16Q96EY4 203 aaKnown RBP18.94■□□□□ 0.62
PTPN12-201ENST00000248594 PKP2Q99959 881 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 KANSL1LA0AUZ9 987 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 UGT1A6P19224 532 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 ITGAXP20702 1163 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 UGT1A1P22309 533 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 UGT1A4P22310 534 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 ADSSP30520 456 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 UGT1A3P35503 534 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 UGT1A5P35504 534 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 SLC18A1P54219 525 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 PSMC5P62195 406 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 NXNQ6DKJ4 435 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 GPR141Q7Z602 305 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 TMEM63AO94886 807 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 PTPN1P18031 435 aaKnown RBP18.93■□□□□ 0.62
PTPN12-201ENST00000248594 PEX3P56589 373 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 SF3B3Q15393 1217 aaKnown RBP18.93■□□□□ 0.62
PTPN12-201ENST00000248594 KYAT3Q6YP21 454 aaKnown RBP18.93■□□□□ 0.62
PTPN12-201ENST00000248594 FAM71AQ8IYT1 594 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 EPB41L1Q9H4G0 881 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 FADS3Q9Y5Q0 445 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 TESPA1A2RU30 521 aaPredicted RBP18.93■□□□□ 0.62
PTPN12-201ENST00000248594 F8VP50 259 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 PROSCO94903 275 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 ETV4P43268 484 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 NR1D2Q14995 579 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 TRIM16LQ309B1 348 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 ZNF394Q53GI3 561 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 HYIQ5T013 277 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 LIN9Q5TKA1 542 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 CROCCP3Q8IVE0 287 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 ACTL9Q8TC94 416 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 FERMT1Q9BQL6 677 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 EPS15L1Q9UBC2 864 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 SCAF8Q9UPN6 1271 aaKnown RBP18.93■□□□□ 0.62
PTPN12-201ENST00000248594 CCDC130P13994 396 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 GAP43P17677 238 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 NME3Q13232 169 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 KLF1Q13351 362 aaPredicted RBP18.93■□□□□ 0.62
PTPN12-201ENST00000248594 DOK7Q18PE1 504 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 FBXW8Q8N3Y1 598 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 ALLCQ8N6M5 410 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 JADE3Q92613 823 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 PLEKHA8Q96JA3 519 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 VPS50Q96JG6 964 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 MARK4Q96L34 752 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 KIFC3Q9BVG8 833 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 GPRC5CQ9NQ84 441 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 PSMD13Q9UNM6 376 aa18.93■□□□□ 0.62
PTPN12-201ENST00000248594 ZNF536O15090 1300 aa18.92■□□□□ 0.62
PTPN12-201ENST00000248594 H3BNX3 289 aa18.92■□□□□ 0.62
PTPN12-201ENST00000248594 MSH4O15457 936 aa18.92■□□□□ 0.62
PTPN12-201ENST00000248594 XRCC1P18887 633 aaPredicted RBP18.92■□□□□ 0.62
PTPN12-201ENST00000248594 SMARCA1P28370 1054 aa18.92■□□□□ 0.62
PTPN12-201ENST00000248594 CENPFP49454 3210 aa18.92■□□□□ 0.62
PTPN12-201ENST00000248594 NUP107P57740 925 aa18.92■□□□□ 0.62
PTPN12-201ENST00000248594 TRAF2Q12933 501 aa18.92■□□□□ 0.62
PTPN12-201ENST00000248594 BSPRYQ5W0U4 402 aa18.92■□□□□ 0.62
PTPN12-201ENST00000248594 SNX29P2Q8IUI4 249 aa18.92■□□□□ 0.62
PTPN12-201ENST00000248594 CPT1BQ92523 772 aa18.92■□□□□ 0.62
PTPN12-201ENST00000248594 NAP1L4Q99733 375 aaKnown RBP18.92■□□□□ 0.62
PTPN12-201ENST00000248594 PCSK1NQ9UHG2 260 aa18.92■□□□□ 0.62
PTPN12-201ENST00000248594 TMED5Q9Y3A6 229 aa18.92■□□□□ 0.62
PTPN12-201ENST00000248594 CICQ96RK0 1608 aaPredicted RBP18.92■□□□□ 0.62
PTPN12-201ENST00000248594 CXorf49A8MYA2 514 aaPredicted RBP18.92■□□□□ 0.62
PTPN12-201ENST00000248594 HOXA7P31268 230 aaPredicted RBP18.92■□□□□ 0.62
PTPN12-201ENST00000248594 CLEC16AQ2KHT3 1053 aa18.92■□□□□ 0.62
PTPN12-201ENST00000248594 SPOPLQ6IQ16 392 aa18.92■□□□□ 0.62
PTPN12-201ENST00000248594 CCDC33Q8N5R6 958 aa18.92■□□□□ 0.62
PTPN12-201ENST00000248594 CXorf38Q8TB03 319 aa18.92■□□□□ 0.62
PTPN12-201ENST00000248594 ATP6V0A1Q93050 837 aa18.92■□□□□ 0.62
PTPN12-201ENST00000248594 C12orf43Q96C57 262 aaKnown RBP18.92■□□□□ 0.62
PTPN12-201ENST00000248594 MOCOSQ96EN8 888 aa18.92■□□□□ 0.62
PTPN12-201ENST00000248594 HSPBP1Q9NZL4 362 aa18.92■□□□□ 0.62
PTPN12-201ENST00000248594 SF3B1O75533 1304 aaKnown RBP eCLIP18.92■□□□□ 0.625e-6■■■■■ 48.4
PTPN12-201ENST00000248594 KRT37O76014 449 aa18.91■□□□□ 0.62
PTPN12-201ENST00000248594 PPP2R5DQ14738 602 aa18.91■□□□□ 0.62
PTPN12-201ENST00000248594 PPM1LQ5SGD2 360 aa18.91■□□□□ 0.62
PTPN12-201ENST00000248594 ELMSAN1Q6PJG2 1045 aa18.91■□□□□ 0.62
PTPN12-201ENST00000248594 ATXN7L3BQ96GX2 97 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms