RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 PYGMP11217 842 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 FECHP22830 423 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 NOVP48745 357 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 KIF19Q2TAC6 998 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 MDH1BQ5I0G3 518 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 CEP70Q8NHQ1 597 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 C7orf43Q8WVR3 580 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 SMARCD1Q96GM5 515 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 ABI2Q9NYB9 513 aaPredicted RBP16.31■□□□□ 0.2
SIN3B-201ENST00000248054 AAR2Q9Y312 384 aaKnown RBP16.31■□□□□ 0.2
SIN3B-201ENST00000248054 TMEM120BA0PK00 339 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 RECQL4O94761 1208 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 LRRC52Q8N7C0 313 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 LENG9Q96B70 501 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 MTBPQ96DY7 904 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 NTPCRQ9BSD7 190 aaKnown RBP16.31■□□□□ 0.2
SIN3B-201ENST00000248054 SYT17Q9BSW7 474 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 FANCGO15287 622 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 PMM2O15305 246 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 NVLO15381 856 aaKnown RBP16.31■□□□□ 0.2
SIN3B-201ENST00000248054 B4GALT4O60513 344 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 KAT5Q92993 513 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 DMAC2Q9NW81 257 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 ILF2Q12905 390 aaKnown RBP16.31■□□□□ 0.2
SIN3B-201ENST00000248054 EFTUD2Q15029 972 aaKnown RBP eCLIP16.31■□□□□ 0.22e-6■■■■■ 30.1
SIN3B-201ENST00000248054 TBCCQ15814 346 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 SLC35G1Q2M3R5 365 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 KCNT1Q5JUK3 1230 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 ARMC3Q5W041 872 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.31■□□□□ 0.2
SIN3B-201ENST00000248054 FRA10AC1Q70Z53 315 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 DCLK2Q8N568 766 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 TTYH3Q9C0H2 523 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 CORO1CQ9ULV4 474 aaPredicted RBP16.31■□□□□ 0.2
SIN3B-201ENST00000248054 SMIM35A0A1B0GVV1 85 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 PRRG1O14668 218 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 UBOX5O94941 541 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 ERBB2P04626 1255 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 PGM1P36871 562 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 TKTL1P51854 596 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 CRYBB1P53674 252 aaPredicted RBP16.3■□□□□ 0.2
SIN3B-201ENST00000248054 OCA2Q04671 838 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 ITIH4Q14624 930 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 RGS9BPQ6ZS82 235 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 ACTL9Q8TC94 416 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 HSFY1Q96LI6 401 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 AGAP3Q96P47 875 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 SLC11A2P49281 568 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 PTK6Q13882 451 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 C10orf120Q5SQS8 335 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 TSHZ1Q6ZSZ6 1077 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 CHSY1Q86X52 802 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 PRCCQ92733 491 aaPredicted RBP16.3■□□□□ 0.2
SIN3B-201ENST00000248054 RMDN1Q96DB5 314 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 HES6Q96HZ4 224 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 FAXDC2Q96IV6 333 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 MRPL9Q9BYD2 267 aaKnown RBP16.3■□□□□ 0.2
SIN3B-201ENST00000248054 ELOVL4Q9GZR5 314 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 HSD3B7Q9H2F3 369 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 EML4Q9HC35 981 aaKnown RBP16.3■□□□□ 0.2
SIN3B-201ENST00000248054 GRID1Q9ULK0 1009 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 ZC3H4Q9UPT8 1303 aaKnown RBP16.3■□□□□ 0.2
SIN3B-201ENST00000248054 CNTFP26441 200 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 YWHAZP63104 245 aaKnown RBP16.3■□□□□ 0.2
SIN3B-201ENST00000248054 YWHAHQ04917 246 aaPredicted RBP16.3■□□□□ 0.2
SIN3B-201ENST00000248054 CACNB2Q08289 660 aaPredicted RBP16.3■□□□□ 0.2
SIN3B-201ENST00000248054 OVOS1Q6IE37 1185 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 EMC1Q8N766 993 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 ACSF2Q96CM8 615 aaPredicted RBP16.3■□□□□ 0.2
SIN3B-201ENST00000248054 FGFBP2Q9BYJ0 223 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 FBXO44Q9H4M3 255 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 FIS1Q9Y3D6 152 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 ITGB4P16144 1822 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 F5H423 210 aaPredicted RBP16.3■□□□□ 0.2
SIN3B-201ENST00000248054 MRPS6P82932 125 aaKnown RBP16.3■□□□□ 0.2
SIN3B-201ENST00000248054 REM2Q8IYK8 340 aaPredicted RBP16.3■□□□□ 0.2
SIN3B-201ENST00000248054 NLGN2Q8NFZ4 835 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 PDCD6IPQ8WUM4 868 aaKnown RBP16.3■□□□□ 0.2
SIN3B-201ENST00000248054 TSSK1BQ9BXA7 367 aa16.3■□□□□ 0.2
SIN3B-201ENST00000248054 FNDC3AQ9Y2H6 1198 aaKnown RBP16.3■□□□□ 0.2
SIN3B-201ENST00000248054 HACD1B0YJ81 288 aa16.29■□□□□ 0.2
SIN3B-201ENST00000248054 RASSF9O75901 435 aa16.29■□□□□ 0.2
SIN3B-201ENST00000248054 RARAP10276 462 aa16.29■□□□□ 0.2
SIN3B-201ENST00000248054 POU5F1Q01860 360 aaKnown RBP16.29■□□□□ 0.2
SIN3B-201ENST00000248054 MAMLD1Q13495 774 aa16.29■□□□□ 0.2
SIN3B-201ENST00000248054 CRELD2Q6UXH1 353 aaPredicted RBP16.29■□□□□ 0.2
SIN3B-201ENST00000248054 LRRC6Q86X45 466 aa16.29■□□□□ 0.2
SIN3B-201ENST00000248054 TMEM169Q96HH4 297 aa16.29■□□□□ 0.2
SIN3B-201ENST00000248054 CDC42EP4Q9H3Q1 356 aaKnown RBP16.29■□□□□ 0.2
SIN3B-201ENST00000248054 ZNF112Q9UJU3 913 aa16.29■□□□□ 0.2
SIN3B-201ENST00000248054 REXO2Q9Y3B8 237 aaKnown RBP16.29■□□□□ 0.2
SIN3B-201ENST00000248054 DNALI1O14645 258 aaPredicted RBP16.29■□□□□ 0.2
SIN3B-201ENST00000248054 KLHL2O95198 593 aa16.29■□□□□ 0.2
SIN3B-201ENST00000248054 TPP2P29144 1249 aaPredicted RBP16.29■□□□□ 0.2
SIN3B-201ENST00000248054 MAP3K7CLP57077 242 aa16.29■□□□□ 0.2
SIN3B-201ENST00000248054 ROR2Q01974 943 aaKnown RBP16.29■□□□□ 0.2
SIN3B-201ENST00000248054 ZNF483Q8TF39 744 aaPredicted RBP16.29■□□□□ 0.2
SIN3B-201ENST00000248054 BTBD7Q9P203 1132 aa16.29■□□□□ 0.2
SIN3B-201ENST00000248054 ZNF711Q9Y462 761 aa16.29■□□□□ 0.2
SIN3B-201ENST00000248054 MYH2Q9UKX2 1941 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms