RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 MCM8Q9UJA3 840 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 TTC23LQ6PF05 361 aa20.46■□□□□ 0.87
SOX4-201ENST00000244745 SYTL5Q8TDW5 730 aaPredicted RBP20.46■□□□□ 0.87
SOX4-201ENST00000244745 WDR27A2RRH5 827 aa20.46■□□□□ 0.87
SOX4-201ENST00000244745 NCF1BA6NI72 391 aaPredicted RBP20.46■□□□□ 0.87
SOX4-201ENST00000244745 NCF1CA8MVU1 366 aaPredicted RBP20.46■□□□□ 0.87
SOX4-201ENST00000244745 NCF1P14598 390 aaPredicted RBP20.46■□□□□ 0.87
SOX4-201ENST00000244745 PCSK1P29120 753 aa20.46■□□□□ 0.87
SOX4-201ENST00000244745 RARRES1P49788 294 aa20.46■□□□□ 0.87
SOX4-201ENST00000244745 POU4F1Q01851 419 aa20.46■□□□□ 0.87
SOX4-201ENST00000244745 SH3GL2Q99962 352 aa20.46■□□□□ 0.87
SOX4-201ENST00000244745 UNKQ9C0B0 810 aaKnown RBP20.46■□□□□ 0.87
SOX4-201ENST00000244745 FAM192AQ9GZU8 254 aa20.46■□□□□ 0.87
SOX4-201ENST00000244745 GANQ9H2C0 597 aa20.46■□□□□ 0.87
SOX4-201ENST00000244745 TUBGCP3Q96CW5 907 aa20.46■□□□□ 0.87
SOX4-201ENST00000244745 ZNF197O14709 1029 aa20.46■□□□□ 0.87
SOX4-201ENST00000244745 PTPN11Q06124 597 aaPredicted RBP20.46■□□□□ 0.87
SOX4-201ENST00000244745 ARHGEF6Q15052 776 aa20.46■□□□□ 0.87
SOX4-201ENST00000244745 FAM131BQ86XD5 332 aa20.46■□□□□ 0.87
SOX4-201ENST00000244745 TMPRSS6Q8IU80 811 aa20.46■□□□□ 0.87
SOX4-201ENST00000244745 MSL3Q8N5Y2 521 aaKnown RBP20.46■□□□□ 0.87
SOX4-201ENST00000244745 ZNF606Q8WXB4 792 aa20.46■□□□□ 0.87
SOX4-201ENST00000244745 CEP41Q9BYV8 373 aa20.46■□□□□ 0.87
SOX4-201ENST00000244745 RIC1Q4ADV7 1423 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 ATP1A4Q13733 1029 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 CNGA2Q16280 664 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 DGKDQ16760 1214 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 SWT1Q5T5J6 900 aaKnown RBP20.45■□□□□ 0.86
SOX4-201ENST00000244745 PIH1D1Q9NWS0 290 aaKnown RBP20.45■□□□□ 0.86
SOX4-201ENST00000244745 RNF112Q9ULX5 631 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 UBQLN1Q9UMX0 589 aaKnown RBP20.45■□□□□ 0.86
SOX4-201ENST00000244745 ZSCAN5DPP0CG00 497 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 CXCL8P10145 99 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 TWF1Q12792 350 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 LRRC55Q6ZSA7 311 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 BAP1Q92560 729 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 KATNAL1Q9BW62 490 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 ZCCHC9Q8N567 271 aaKnown RBP20.45■□□□□ 0.86
SOX4-201ENST00000244745 CENPTQ96BT3 561 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 DDX4Q9NQI0 724 aaKnown RBP20.45■□□□□ 0.86
SOX4-201ENST00000244745 REXO2Q9Y3B8 237 aaKnown RBP20.45■□□□□ 0.86
SOX4-201ENST00000244745 AKT1P31749 480 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 VEPH1Q14D04 833 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 TNIP2Q8NFZ5 429 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 BLOC1S5Q8TDH9 187 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 SPDYE5A6NIY4 337 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 ANKRD63C9JTQ0 380 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 ETS1P14921 441 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 RAD51Q06609 339 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 SPDYE7PQ495Y7 208 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 FAR2Q96K12 515 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 ECSITQ9BQ95 431 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 TMEM79Q9BSE2 394 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 KIAA1257Q9ULG3 409 aa20.45■□□□□ 0.86
SOX4-201ENST00000244745 AAR2Q9Y312 384 aaKnown RBP20.45■□□□□ 0.86
SOX4-201ENST00000244745 NR5A2O00482 541 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 TPP2P29144 1249 aaPredicted RBP20.44■□□□□ 0.86
SOX4-201ENST00000244745 NUP107P57740 925 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 AMPD2Q01433 879 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 FAAP100Q0VG06 881 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 LAMC2Q13753 1193 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 GALNTL6Q49A17 601 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 SRPK1Q96SB4 655 aaKnown RBP20.44■□□□□ 0.86
SOX4-201ENST00000244745 GGA2Q9UJY4 613 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 RAG1P15918 1043 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 GRK2P25098 689 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 PPP3CCP48454 512 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 KCNJ2P63252 427 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 DEPDC1Q5TB30 811 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 RIMS1Q86UR5 1692 aaKnown RBP20.44■□□□□ 0.86
SOX4-201ENST00000244745 PSMG1O95456 288 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 ZNF23P17027 643 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 MTFR1Q15390 333 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 ZNF662Q6ZS27 426 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 PAWRQ96IZ0 340 aaKnown RBP20.44■□□□□ 0.86
SOX4-201ENST00000244745 FICDQ9BVA6 458 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 TRIM45Q9H8W5 580 aaPredicted RBP20.44■□□□□ 0.86
SOX4-201ENST00000244745 MICAL2O94851 1124 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 EFL1Q7Z2Z2 1120 aaKnown RBP20.44■□□□□ 0.86
SOX4-201ENST00000244745 UBE2OQ9C0C9 1292 aaKnown RBP20.44■□□□□ 0.86
SOX4-201ENST00000244745 ZNF556Q9HAH1 456 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 RNPEPL1Q9HAU8 725 aa20.44■□□□□ 0.86
SOX4-201ENST00000244745 WTIPA6NIX2 430 aaPredicted RBP20.43■□□□□ 0.86
SOX4-201ENST00000244745 WNT7AO00755 349 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 LAMTOR4Q0VGL1 99 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 RRP1BQ14684 758 aaKnown RBP20.43■□□□□ 0.86
SOX4-201ENST00000244745 ZNF184Q99676 751 aaPredicted RBP20.43■□□□□ 0.86
SOX4-201ENST00000244745 SOAT2O75908 522 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 LRRC74AQ0VAA2 488 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 MREGQ8N565 214 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 KAT5Q92993 513 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 FAM136AQ96C01 138 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 UBP1Q9NZI7 540 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 ASTN1O14525 1302 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 C5orf58C9J3I9 102 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 ADRA1DP25100 572 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 NUMBP49757 651 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 CDK16Q00536 496 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 PTK2BQ14289 1009 aa20.43■□□□□ 0.86
SOX4-201ENST00000244745 MGAT5BQ3V5L5 792 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms