RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 SCUBE1Q8IWY4 988 aa11.37□□□□□ -0.59
COPA-201ENST00000241704 CAPNS2Q96L46 248 aa11.37□□□□□ -0.59
COPA-201ENST00000241704 PORCNQ9H237 461 aa11.37□□□□□ -0.59
COPA-201ENST00000241704 TUBA8Q9NY65 449 aaPredicted RBP11.37□□□□□ -0.59
COPA-201ENST00000241704 DPP7Q9UHL4 492 aa11.37□□□□□ -0.59
COPA-201ENST00000241704 R3HDM2Q9Y2K5 976 aaKnown RBP11.37□□□□□ -0.59
COPA-201ENST00000241704 BTNL10A8MVZ5 291 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 RBAK-RBAKDNI3L0D1 243 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 MCF2P10911 925 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 GPD1P21695 349 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 DNAJB2P25686 324 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 RPL21P46778 160 aaKnown RBP11.36□□□□□ -0.59
COPA-201ENST00000241704 PSEN2P49810 448 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 SULT1E1P49888 294 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 DRG2P55039 364 aaKnown RBP11.36□□□□□ -0.59
COPA-201ENST00000241704 MTTPP55157 894 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 ELAVL2Q12926 359 aaKnown RBP11.36□□□□□ -0.59
COPA-201ENST00000241704 ATG16L1Q676U5 607 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 ITPRIPL1Q6GPH6 555 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 SPOPLQ6IQ16 392 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 SDE2Q6IQ49 451 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 SLC47A2Q86VL8 602 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 SLC13A5Q86YT5 568 aaPredicted RBP11.36□□□□□ -0.59
COPA-201ENST00000241704 CROCCP3Q8IVE0 287 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 NKX2-3Q8TAU0 364 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 MRPS31Q92665 395 aaKnown RBP11.36□□□□□ -0.59
COPA-201ENST00000241704 WNK4Q96J92 1243 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 RSAD1Q9HA92 442 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 NMRK2Q9NPI5 230 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 MID2Q9UJV3 735 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 PHF24Q9UPV7 400 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 GRAP2O75791 330 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 CABYRO75952 493 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 CKMP06732 381 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 ATICP31939 592 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 MYBPC3Q14896 1274 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 NPY5RQ15761 445 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 GOLGA7BQ2TAP0 167 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 EFHC1Q5JVL4 640 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 TRIM67Q6ZTA4 783 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 LRRC6Q86X45 466 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 SLC20A1Q8WUM9 679 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 KLHL4Q9C0H6 718 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 CYP3A43Q9HB55 503 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 CISHQ9NSE2 258 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 BFARQ9NZS9 450 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 VAV3Q9UKW4 847 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 HOXC6P09630 235 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 CENPCQ03188 943 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 MAP2K5Q13163 448 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 DGKZQ13574 1117 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 ECM1Q16610 540 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 RARS2Q5T160 578 aaKnown RBP11.36□□□□□ -0.59
COPA-201ENST00000241704 LVRNQ6Q4G3 990 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 ZBTB8BQ8NAP8 495 aaPredicted RBP11.36□□□□□ -0.59
COPA-201ENST00000241704 DGCR14Q96DF8 476 aaKnown RBP11.36□□□□□ -0.59
COPA-201ENST00000241704 ABHD8Q96I13 439 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 C9orf72Q96LT7 481 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 ECSITQ9BQ95 431 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 DRC3Q9H069 523 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 TRPV6Q9H1D0 765 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 ZMYND8Q9ULU4 1186 aaPredicted RBP11.36□□□□□ -0.59
COPA-201ENST00000241704 ALS2Q96Q42 1657 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 TBKBP1A7MCY6 615 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 SPATA31C2B4DYI2 1134 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 DFFAO00273 331 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 PGK1P00558 417 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 ITGA2BP08514 1039 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 CPA2P48052 419 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 ADRM1Q16186 407 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 HIF1AQ16665 826 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 C10orf120Q5SQS8 335 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 TMTC4Q5T4D3 741 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 NT5DC3Q86UY8 548 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 SLC9A9Q8IVB4 645 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 CATSPER1Q8NEC5 780 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 HTATIP2Q9BUP3 242 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 EIF2AQ9BY44 585 aaKnown RBP11.36□□□□□ -0.59
COPA-201ENST00000241704 STX18Q9P2W9 335 aaKnown RBP11.36□□□□□ -0.59
COPA-201ENST00000241704 ASB3Q9Y575 518 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 LRP6O75581 1613 aa11.36□□□□□ -0.59
COPA-201ENST00000241704 ANKRD63C9JTQ0 380 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 DDX3XO00571 662 aaKnown RBP eCLIP11.35□□□□□ -0.592e-14■■□□□ 13.7
COPA-201ENST00000241704 ZSCAN9O15535 394 aaPredicted RBP11.35□□□□□ -0.59
COPA-201ENST00000241704 LYPLA2O95372 231 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 TTC4O95801 387 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 CTXN3Q4LDR2 81 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 TDRD10Q5VZ19 366 aaKnown RBP11.35□□□□□ -0.59
COPA-201ENST00000241704 LRRC8BQ6P9F7 803 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 BRSK2Q8IWQ3 736 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 CPB2Q96IY4 423 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 TMEM109Q9BVC6 243 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 FOXP3Q9BZS1 431 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 UTP6Q9NYH9 597 aaKnown RBP11.35□□□□□ -0.59
COPA-201ENST00000241704 USP20Q9Y2K6 914 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 CASZ1Q86V15 1759 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 COPEO14579 308 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 KDM1AO60341 852 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 CXCL8P10145 99 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 PRKAR2AP13861 404 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms