RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 ARFGAP2Q8N6H7 521 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 SLC35G2Q8TBE7 412 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 USP7Q93009 1102 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 ARL8AQ96BM9 186 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 SCYL1Q96KG9 808 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 KCNJ15Q99712 375 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 AGPAT1Q99943 283 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 MAF1Q9H063 256 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 KIAA1683Q9H0B3 1180 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 RAB17Q9H0T7 212 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 STK32BQ9NY57 414 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 EBF1Q9UH73 591 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 FAM153AQ9UHL3 310 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 EXOC7Q9UPT5 735 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 ZHX2Q9Y6X8 837 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 MYH11P35749 1972 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 EP400Q96L91 3159 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 GOLGA6L10A0A0M3HER8 536 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 ZSCAN5CA6NGD5 496 aaPredicted RBP8.38□□□□□ -1.07
CXCR4-201ENST00000241393 GOLGA6L10A6NI86 522 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 ZNF233A6NK53 670 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 GGPS1O95749 300 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 TRIM49P0CI25 452 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 TRIM49CP0CI26 452 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 GZMAP12544 262 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 ABCD1P33897 745 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 SLC6A11P48066 632 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 DRG2P55039 364 aaKnown RBP8.38□□□□□ -1.07
CXCR4-201ENST00000241393 NCKAP1LP55160 1127 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 PTENP60484 403 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 PSMC5P62195 406 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 GNGT1P63211 74 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 UBXN2AP68543 259 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 MRPS25P82663 173 aaKnown RBP8.38□□□□□ -1.07
CXCR4-201ENST00000241393 POU5F1Q01860 360 aaKnown RBP8.38□□□□□ -1.07
CXCR4-201ENST00000241393 MVKQ03426 396 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 BIRC3Q13489 604 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 DHX34Q14147 1143 aaKnown RBP8.38□□□□□ -1.07
CXCR4-201ENST00000241393 HLTFQ14527 1009 aaKnown RBP eCLIP8.38□□□□□ -1.07
CXCR4-201ENST00000241393 GPR19Q15760 415 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 TMEM177Q53S58 311 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 ARTNQ5T4W7 220 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 OLFML2BQ68BL8 750 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 SPATS2Q86XZ4 545 aaKnown RBP8.38□□□□□ -1.07
CXCR4-201ENST00000241393 NLGN4XQ8N0W4 816 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 C2orf69Q8N8R5 385 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 CHST14Q8NCH0 376 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 ATL2Q8NHH9 583 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 ATP6V1G3Q96LB4 118 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 RPS6KC1Q96S38 1066 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 C17orf75Q9HAS0 396 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 VEZTQ9HBM0 779 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 SLC38A10Q9HBR0 1119 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 FBXO28Q9NVF7 368 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 GRIN2DO15399 1336 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 EMSYQ7Z589 1322 aa8.38□□□□□ -1.07
CXCR4-201ENST00000241393 ATXN2Q99700 1313 aaKnown RBP8.38□□□□□ -1.07
CXCR4-201ENST00000241393 FOXN3O00409 490 aaPredicted RBP8.37□□□□□ -1.07
CXCR4-201ENST00000241393 DKC1O60832 514 aaKnown RBP eCLIP8.37□□□□□ -1.07
CXCR4-201ENST00000241393 RTN2O75298 545 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 RAD17O75943 681 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 GTF2H1P32780 548 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 MXI1P50539 228 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 GUCY2FP51841 1108 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 ITGB3BPQ13352 177 aaPredicted RBP8.37□□□□□ -1.07
CXCR4-201ENST00000241393 MTMR1Q13613 665 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 TNFAIP1Q13829 316 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 USP37Q86T82 979 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 C11orf74Q86VG3 221 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 TRIM48Q8IWZ4 208 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 PLEKHO2Q8TD55 490 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 HOOK2Q96ED9 719 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 PEX11GQ96HA9 241 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 KIRREL1Q96J84 757 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 FAM81BQ96LP2 452 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 RUNDC3BQ96NL0 473 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 SENP7Q9BQF6 1050 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 PAGR1Q9BTK6 254 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 ZNF341Q9BYN7 854 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 FAM129AQ9BZQ8 928 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 TMEM39BQ9GZU3 492 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 SLC6A17Q9H1V8 727 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 IKZF4Q9H2S9 585 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 TMBIM4Q9HC24 238 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 POLD4Q9HCU8 107 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 ZFP64Q9NPA5 681 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 HSPBP1Q9NZL4 362 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 COL20A1Q9P218 1284 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 TCEAL9Q9UHQ7 104 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 COQ4Q9Y3A0 265 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 UTP11Q9Y3A2 253 aaKnown RBP8.37□□□□□ -1.07
CXCR4-201ENST00000241393 H0YGN5 161 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 EBAG9O00559 213 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 NFIBO00712 420 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 MAFGO15525 162 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 ERLIN2O94905 339 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 KRT14P02533 472 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 MPOP05164 745 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 NR1D1P20393 614 aa8.37□□□□□ -1.07
CXCR4-201ENST00000241393 SCP2P22307 547 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms