RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 NCAM1P13591 858 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 BSPRYQ5W0U4 402 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 NUP93Q8N1F7 819 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 KLHL23Q8NBE8 558 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 SP7Q8TDD2 431 aaPredicted RBP19.41■□□□□ 0.7
SNX17-201ENST00000233575 NT5C3BQ969T7 300 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 MAGEB5Q9BZ81 275 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 AAASQ9NRG9 546 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 COL4A4P53420 1690 aaPredicted RBP19.41■□□□□ 0.7
SNX17-201ENST00000233575 CAPN9O14815 690 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 SART1O43290 800 aaKnown RBP19.41■□□□□ 0.7
SNX17-201ENST00000233575 URODP06132 367 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 PPM1AP35813 382 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 MTMR3Q13615 1198 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 SPOCD1Q6ZMY3 1216 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 RCOR2Q8IZ40 523 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 SCML4Q8N228 414 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 PRELID2Q8N945 189 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 IRGQQ8WZA9 623 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 PNKPQ96T60 521 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 PLVAPQ9BX97 442 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 OSBPL8Q9BZF1 889 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 NMUR1Q9HB89 426 aa19.41■□□□□ 0.7
SNX17-201ENST00000233575 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.41■□□□□ 0.7
SNX17-201ENST00000233575 DDX56Q9NY93 547 aaKnown RBP19.41■□□□□ 0.7
SNX17-201ENST00000233575 GREB1Q4ZG55 1949 aa19.4■□□□□ 0.7
SNX17-201ENST00000233575 M0QYT0 321 aa19.4■□□□□ 0.7
SNX17-201ENST00000233575 FSCN2O14926 492 aa19.4■□□□□ 0.7
SNX17-201ENST00000233575 ARHGEF15O94989 841 aa19.4■□□□□ 0.7
SNX17-201ENST00000233575 SEC24AO95486 1093 aa19.4■□□□□ 0.7
SNX17-201ENST00000233575 MYOGP15173 224 aa19.4■□□□□ 0.7
SNX17-201ENST00000233575 ATF6P18850 670 aa19.4■□□□□ 0.7
SNX17-201ENST00000233575 SMARCB1Q12824 385 aa19.4■□□□□ 0.7
SNX17-201ENST00000233575 CA9Q16790 459 aa19.4■□□□□ 0.7
SNX17-201ENST00000233575 ZC3H12AQ5D1E8 599 aaKnown RBP19.4■□□□□ 0.7
SNX17-201ENST00000233575 RASIP1Q5U651 963 aa19.4■□□□□ 0.7
SNX17-201ENST00000233575 KAZNQ674X7 775 aa19.4■□□□□ 0.7
SNX17-201ENST00000233575 FAM109BQ6ICB4 259 aaPredicted RBP19.4■□□□□ 0.7
SNX17-201ENST00000233575 BNIPLQ7Z465 357 aa19.4■□□□□ 0.7
SNX17-201ENST00000233575 SCD5Q86SK9 330 aa19.4■□□□□ 0.7
SNX17-201ENST00000233575 FAM131BQ86XD5 332 aa19.4■□□□□ 0.7
SNX17-201ENST00000233575 CCDC185Q8N715 623 aa19.4■□□□□ 0.7
SNX17-201ENST00000233575 PHOSPHO2Q8TCD6 241 aa19.4■□□□□ 0.7
SNX17-201ENST00000233575 RBM41Q96IZ5 413 aaKnown RBP19.4■□□□□ 0.7
SNX17-201ENST00000233575 NAP1L3Q99457 506 aaPredicted RBP19.4■□□□□ 0.7
SNX17-201ENST00000233575 SNRNP25Q9BV90 132 aaKnown RBP19.4■□□□□ 0.7
SNX17-201ENST00000233575 ZNF638Q14966 1978 aaKnown RBP19.4■□□□□ 0.7
SNX17-201ENST00000233575 CCDC85CA6NKD9 419 aa19.39■□□□□ 0.69
SNX17-201ENST00000233575 GRXCR1A8MXD5 290 aa19.39■□□□□ 0.69
SNX17-201ENST00000233575 CSPG5O95196 566 aa19.39■□□□□ 0.69
SNX17-201ENST00000233575 KDELR1P24390 212 aa19.39■□□□□ 0.69
SNX17-201ENST00000233575 CDKN2BP42772 138 aa19.39■□□□□ 0.69
SNX17-201ENST00000233575 SLC7A5Q01650 507 aa19.39■□□□□ 0.69
SNX17-201ENST00000233575 NME3Q13232 169 aa19.39■□□□□ 0.69
SNX17-201ENST00000233575 KLF1Q13351 362 aaPredicted RBP19.39■□□□□ 0.69
SNX17-201ENST00000233575 STRADAQ7RTN6 431 aa19.39■□□□□ 0.69
SNX17-201ENST00000233575 CMASQ8NFW8 434 aaPredicted RBP19.39■□□□□ 0.69
SNX17-201ENST00000233575 SLC7A14Q8TBB6 771 aa19.39■□□□□ 0.69
SNX17-201ENST00000233575 GIPC2Q8TF65 315 aa19.39■□□□□ 0.69
SNX17-201ENST00000233575 TMPRSS4Q9NRS4 437 aa19.39■□□□□ 0.69
SNX17-201ENST00000233575 PIGVQ9NUD9 493 aa19.39■□□□□ 0.69
SNX17-201ENST00000233575 STAP1Q9ULZ2 295 aa19.39■□□□□ 0.69
SNX17-201ENST00000233575 PLXNA3P51805 1871 aa19.39■□□□□ 0.69
SNX17-201ENST00000233575 CHD9Q3L8U1 2897 aa19.39■□□□□ 0.69
SNX17-201ENST00000233575 YWHAGP61981 247 aaKnown RBP eCLIP19.39■□□□□ 0.69
SNX17-201ENST00000233575 C2orf15Q8WU43 125 aaKnown RBP19.39■□□□□ 0.69
SNX17-201ENST00000233575 FAM118BQ9BPY3 351 aa19.39■□□□□ 0.69
SNX17-201ENST00000233575 ZBP1Q9H171 429 aa19.39■□□□□ 0.69
SNX17-201ENST00000233575 OSER1Q9NX31 292 aa19.39■□□□□ 0.69
SNX17-201ENST00000233575 NUDT5Q9UKK9 219 aa19.39■□□□□ 0.69
SNX17-201ENST00000233575 R3HDM2Q9Y2K5 976 aaKnown RBP19.39■□□□□ 0.69
SNX17-201ENST00000233575 CDH23Q9H251 3354 aa19.38■□□□□ 0.69
SNX17-201ENST00000233575 hCG_1818297A0A087WSY0 165 aa19.38■□□□□ 0.69
SNX17-201ENST00000233575 A0A1W2PQH9 124 aa19.38■□□□□ 0.69
SNX17-201ENST00000233575 DYNC1I1O14576 645 aa19.38■□□□□ 0.69
SNX17-201ENST00000233575 ABLIM3O94929 683 aa19.38■□□□□ 0.69
SNX17-201ENST00000233575 KRT17Q04695 432 aa19.38■□□□□ 0.69
SNX17-201ENST00000233575 ODF2Q5BJF6 829 aa19.38■□□□□ 0.69
SNX17-201ENST00000233575 DENND5BQ6ZUT9 1274 aa19.38■□□□□ 0.69
SNX17-201ENST00000233575 GPR161Q8N6U8 529 aaKnown RBP19.38■□□□□ 0.69
SNX17-201ENST00000233575 KCTD6Q8NC69 237 aa19.38■□□□□ 0.69
SNX17-201ENST00000233575 ZNF461Q8TAF7 563 aa19.38■□□□□ 0.69
SNX17-201ENST00000233575 PARD6BQ9BYG5 372 aa19.38■□□□□ 0.69
SNX17-201ENST00000233575 ALG13Q9NP73 1137 aaKnown RBP19.38■□□□□ 0.69
SNX17-201ENST00000233575 MRPL17Q9NRX2 175 aaKnown RBP19.38■□□□□ 0.69
SNX17-201ENST00000233575 DMGDHQ9UI17 866 aaKnown RBP19.38■□□□□ 0.69
SNX17-201ENST00000233575 CEP290O15078 2479 aa19.38■□□□□ 0.69
SNX17-201ENST00000233575 CCDC188H7C350 402 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 RAD51CO43502 376 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 LILRB3O75022 631 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 ZMYND10O75800 440 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 ENDOD1O94919 500 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 DESP17661 470 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 ARSEP51690 589 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 CDH6P55285 790 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 MMRN1Q13201 1228 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 TFDP3Q5H9I0 405 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 C8orf74Q6P047 294 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 C1orf54Q8WWF1 131 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 ATG4AQ8WYN0 398 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms