RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 CCDC13Q8IYE1 715 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 PDIK1LQ8N165 341 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 CCDC197Q8NCU1 140 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 PLCD4Q9BRC7 762 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 PCDH18Q9HCL0 1135 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 NGRNQ9NPE2 291 aaKnown RBP17.56■□□□□ 0.4
GAPDH-201ENST00000229239 M0QZ92 97 aa17.55■□□□□ 0.4
GAPDH-201ENST00000229239 DUSP11O75319 330 aaKnown RBP17.55■□□□□ 0.4
GAPDH-201ENST00000229239 SPAG6O75602 509 aa17.55■□□□□ 0.4
GAPDH-201ENST00000229239 ZNF189O75820 626 aaPredicted RBP17.55■□□□□ 0.4
GAPDH-201ENST00000229239 QPCTQ16769 361 aa17.55■□□□□ 0.4
GAPDH-201ENST00000229239 CDO1Q16878 200 aa17.55■□□□□ 0.4
GAPDH-201ENST00000229239 KLHL38Q2WGJ6 581 aa17.55■□□□□ 0.4
GAPDH-201ENST00000229239 ANKRD20A8PQ5CZ79 823 aa17.55■□□□□ 0.4
GAPDH-201ENST00000229239 EFHC1Q5JVL4 640 aa17.55■□□□□ 0.4
GAPDH-201ENST00000229239 CCDC121Q6ZUS5 278 aa17.55■□□□□ 0.4
GAPDH-201ENST00000229239 PIGWQ7Z7B1 504 aa17.55■□□□□ 0.4
GAPDH-201ENST00000229239 SCUBE3Q8IX30 993 aa17.55■□□□□ 0.4
GAPDH-201ENST00000229239 C10orf67Q8IYJ2 551 aa17.55■□□□□ 0.4
GAPDH-201ENST00000229239 HACE1Q8IYU2 909 aa17.55■□□□□ 0.4
GAPDH-201ENST00000229239 FAM71DQ8N9W8 422 aa17.55■□□□□ 0.4
GAPDH-201ENST00000229239 SMG8Q8ND04 991 aaKnown RBP17.55■□□□□ 0.4
GAPDH-201ENST00000229239 DPEP3Q9H4B8 488 aa17.55■□□□□ 0.4
GAPDH-201ENST00000229239 VPS37BQ9H9H4 285 aa17.55■□□□□ 0.4
GAPDH-201ENST00000229239 PAK5Q9P286 719 aa17.55■□□□□ 0.4
GAPDH-201ENST00000229239 CTNNAL1Q9UBT7 734 aa17.55■□□□□ 0.4
GAPDH-201ENST00000229239 SMG5Q9UPR3 1016 aaKnown RBP17.55■□□□□ 0.4
GAPDH-201ENST00000229239 SCN1AP35498 2009 aa17.55■□□□□ 0.4
GAPDH-201ENST00000229239 BCLAF3A2AJT9 711 aaKnown RBP17.54■□□□□ 0.4
GAPDH-201ENST00000229239 PIK3R2O00459 728 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 XPO1O14980 1071 aaKnown RBP17.54■□□□□ 0.4
GAPDH-201ENST00000229239 SPTLC1O15269 473 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 GRAP2O75791 330 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 ATP11AP98196 1134 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 RNASELQ05823 741 aaKnown RBP17.54■□□□□ 0.4
GAPDH-201ENST00000229239 DPYSL2Q16555 572 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 SCYL2Q6P3W7 929 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 STRADAQ7RTN6 431 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 PSTKQ8IV42 348 aaKnown RBP17.54■□□□□ 0.4
GAPDH-201ENST00000229239 ADGRF2Q8IZF7 708 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 PLD5Q8N7P1 536 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 PYROXD1Q8WU10 500 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 LENG1Q96BZ8 264 aaPredicted RBP17.54■□□□□ 0.4
GAPDH-201ENST00000229239 SNRNP25Q9BV90 132 aaKnown RBP17.54■□□□□ 0.4
GAPDH-201ENST00000229239 C11orf49Q9H6J7 331 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 SSU72Q9NP77 194 aaKnown RBP17.54■□□□□ 0.4
GAPDH-201ENST00000229239 SLC38A7Q9NVC3 462 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 GTF2IRD1Q9UHL9 959 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.54■□□□□ 0.4
GAPDH-201ENST00000229239 CHADO15335 359 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 GABBR2O75899 941 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 FSBPO95073 299 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 FGFR1P11362 822 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 IL4RP24394 825 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 HDAC4P56524 1084 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 BCAR1P56945 870 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 BEX3Q00994 111 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 IFT88Q13099 833 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 MMRN1Q13201 1228 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 XRCC4Q13426 336 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 EFHC2Q5JST6 749 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 RSPH3Q86UC2 560 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 CKAP2Q8WWK9 683 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 HNRNPABQ99729 332 aaKnown RBP17.54■□□□□ 0.4
GAPDH-201ENST00000229239 MTG1Q9BT17 334 aaPredicted RBP17.54■□□□□ 0.4
GAPDH-201ENST00000229239 KCNK9Q9NPC2 374 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 CHST12Q9NRB3 414 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 KLK14Q9P0G3 267 aa17.54■□□□□ 0.4
GAPDH-201ENST00000229239 XPO7Q9UIA9 1087 aaKnown RBP17.54■□□□□ 0.4
GAPDH-201ENST00000229239 RASA4BC9J798 803 aa17.53■□□□□ 0.4
GAPDH-201ENST00000229239 H7C0C1 242 aa17.53■□□□□ 0.4
GAPDH-201ENST00000229239 PRPF4O43172 522 aaKnown RBP eCLIP17.53■□□□□ 0.46e-7■■□□□ 12.4
GAPDH-201ENST00000229239 RASA4O43374 803 aa17.53■□□□□ 0.4
GAPDH-201ENST00000229239 GHRP10912 638 aa17.53■□□□□ 0.4
GAPDH-201ENST00000229239 GCAP28676 217 aa17.53■□□□□ 0.4
GAPDH-201ENST00000229239 ATP5OP48047 213 aa17.53■□□□□ 0.4
GAPDH-201ENST00000229239 NR2C2P49116 596 aa17.53■□□□□ 0.4
GAPDH-201ENST00000229239 LILRA4P59901 499 aa17.53■□□□□ 0.4
GAPDH-201ENST00000229239 MRPS6P82932 125 aaKnown RBP17.53■□□□□ 0.4
GAPDH-201ENST00000229239 ZNF200P98182 395 aaPredicted RBP17.53■□□□□ 0.4
GAPDH-201ENST00000229239 FASTKD3Q14CZ7 662 aaKnown RBP17.53■□□□□ 0.4
GAPDH-201ENST00000229239 TRABD2AQ86V40 505 aa17.53■□□□□ 0.4
GAPDH-201ENST00000229239 CYP4X1Q8N118 509 aa17.53■□□□□ 0.4
GAPDH-201ENST00000229239 PQLC3Q8N755 202 aa17.53■□□□□ 0.4
GAPDH-201ENST00000229239 RNF39Q9H2S5 420 aa17.53■□□□□ 0.4
GAPDH-201ENST00000229239 KDM4CQ9H3R0 1056 aa17.53■□□□□ 0.4
GAPDH-201ENST00000229239 RCOR3Q9P2K3 495 aaPredicted RBP17.53■□□□□ 0.4
GAPDH-201ENST00000229239 PSMC3IPQ9P2W1 217 aaPredicted RBP17.53■□□□□ 0.4
GAPDH-201ENST00000229239 TRPV2Q9Y5S1 764 aa17.53■□□□□ 0.4
GAPDH-201ENST00000229239 TRIP11Q15643 1979 aa17.53■□□□□ 0.4
GAPDH-201ENST00000229239 FAM47DPA6NHR8 397 aa17.52■□□□□ 0.4
GAPDH-201ENST00000229239 TRIM66O15016 1216 aa17.52■□□□□ 0.4
GAPDH-201ENST00000229239 VIMP08670 466 aaKnown RBP17.52■□□□□ 0.4
GAPDH-201ENST00000229239 PDGFRBP09619 1106 aa17.52■□□□□ 0.4
GAPDH-201ENST00000229239 CCDC130P13994 396 aa17.52■□□□□ 0.4
GAPDH-201ENST00000229239 ADORA2BP29275 332 aa17.52■□□□□ 0.4
GAPDH-201ENST00000229239 GEMIN4P57678 1058 aaKnown RBP17.52■□□□□ 0.4
GAPDH-201ENST00000229239 GJA9P57773 515 aa17.52■□□□□ 0.4
GAPDH-201ENST00000229239 IL9RQ01113 521 aa17.52■□□□□ 0.4
GAPDH-201ENST00000229239 SOX4Q06945 474 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms