RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 NDC80O14777 642 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 KCNN4O15554 427 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 SNNO75324 88 aaPredicted RBP12.88□□□□□ -0.35
NUP88-201ENST00000225696 RTN3O95197 1032 aaPredicted RBP12.88□□□□□ -0.35
NUP88-201ENST00000225696 APRTP07741 180 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 SNRPAP09012 282 aaKnown RBP12.88□□□□□ -0.35
NUP88-201ENST00000225696 GSTA2P09210 222 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 RBL1P28749 1068 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 STIP1P31948 543 aaKnown RBP12.88□□□□□ -0.35
NUP88-201ENST00000225696 BAG6P46379 1132 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 ATP5OP48047 213 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 CDH6P55285 790 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 DSG1Q02413 1049 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 PEX6Q13608 980 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 NOMO1Q15155 1222 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 CDO1Q16878 200 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 ZNF699Q32M78 642 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 ANGEL2Q5VTE6 544 aaKnown RBP12.88□□□□□ -0.35
NUP88-201ENST00000225696 C16orf46Q6P387 395 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 TMEM192Q8IY95 271 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 ADGRF2Q8IZF7 708 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 ZFAND2BQ8WV99 257 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 MTBPQ96DY7 904 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 RILPQ96NA2 401 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 TRIM4Q9C037 500 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 HEY1Q9Y5J3 304 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 MAFBQ9Y5Q3 323 aaPredicted RBP12.88□□□□□ -0.35
NUP88-201ENST00000225696 NR2E3Q9Y5X4 410 aa12.88□□□□□ -0.35
NUP88-201ENST00000225696 SLC15A5A6NIM6 579 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 SPATA31C2B4DYI2 1134 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 SPECC1L-ADORA2AF8WAN1 911 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 MSCO60682 206 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 HOXC6P09630 235 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 ETS2P15036 469 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 TSHRP16473 764 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 IL4RP24394 825 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 GSTT1P30711 240 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 YWHAEP62258 255 aaKnown RBP12.87□□□□□ -0.35
NUP88-201ENST00000225696 LPCAT4Q643R3 524 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 UNC5AQ6ZN44 842 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 APLFQ8IW19 511 aaPredicted RBP12.87□□□□□ -0.35
NUP88-201ENST00000225696 NDUFAF2Q8N183 169 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 NSUN6Q8TEA1 469 aaKnown RBP12.87□□□□□ -0.35
NUP88-201ENST00000225696 PRPF31Q8WWY3 499 aaKnown RBP12.87□□□□□ -0.35
NUP88-201ENST00000225696 SLC7A3Q8WY07 619 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 AZIN2Q96A70 460 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 TRAPPC9Q96Q05 1148 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 CAMKK2Q96RR4 588 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 APOL6Q9BWW8 343 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 OCEL1Q9H607 264 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 SMYD3Q9H7B4 428 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 ZNF302Q9NR11 478 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 NDE1Q9NXR1 346 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 ANGPTL2Q9UKU9 493 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 MGAMO43451 1857 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.87□□□□□ -0.35
NUP88-201ENST00000225696 SDR42E2A6NKP2 422 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 ADCY3O60266 1144 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 RNF8O76064 485 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 SRGAP2CP0DJJ0 459 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 ADORA2AP29274 412 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 CRABP2P29373 138 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 TRPC3Q13507 836 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 TUBB3Q13509 450 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 DUOXA2Q1HG44 320 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 TRMT5Q32P41 509 aaKnown RBP12.87□□□□□ -0.35
NUP88-201ENST00000225696 CNPY1Q3B7I2 92 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 SFT2D3Q587I9 215 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 DPH6Q7L8W6 267 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 FAM83AQ86UY5 434 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 ARHGAP24Q8N264 748 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 UBA3Q8TBC4 463 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 FNIP1Q8TF40 1166 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 TEPSINQ96N21 525 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 GBP5Q96PP8 586 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 PCYT2Q99447 389 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 FRMD8P1Q9BZ68 369 aaPredicted RBP12.87□□□□□ -0.35
NUP88-201ENST00000225696 MAGEB5Q9BZ81 275 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 PNPLA8Q9NP80 782 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 CPSF2Q9P2I0 782 aaKnown RBP12.87□□□□□ -0.35
NUP88-201ENST00000225696 ADAMTS6Q9UKP5 1117 aa12.87□□□□□ -0.35
NUP88-201ENST00000225696 F5H423 210 aaPredicted RBP12.86□□□□□ -0.35
NUP88-201ENST00000225696 CHADO15335 359 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 MAFGO15525 162 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 DKC1O60832 514 aaKnown RBP eCLIP12.86□□□□□ -0.35
NUP88-201ENST00000225696 KRT37O76014 449 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 PDE5AO76074 875 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 HMGCRP04035 888 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 BPGMP07738 259 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 GJB1P08034 283 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 KRT19P08727 400 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 SPATA31D3P0C874 917 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 CD1EP15812 388 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 PRKCHP24723 683 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 ARRB2P32121 409 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 GRIA2P42262 883 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 RPS6KA3P51812 740 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 SPATA31D4Q6ZUB0 917 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 DENND5BQ6ZUT9 1274 aa12.86□□□□□ -0.35
NUP88-201ENST00000225696 ZNF534Q76KX8 674 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms