RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 IARS2Q9NSE4 1012 aaKnown RBP19.54■□□□□ 0.72
SMPD3-201ENST00000219334 RBM22Q9NW64 420 aaKnown RBP eCLIP19.54■□□□□ 0.72
SMPD3-201ENST00000219334 DCDC2Q9UHG0 476 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 ADCY3O60266 1144 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 MAN1A2O60476 641 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 PLA2G6O60733 806 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 SERPINB10P48595 397 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 TRPC1P48995 793 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 PLEKHM3Q6ZWE6 761 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 DDX42Q86XP3 938 aaKnown RBP eCLIP19.54■□□□□ 0.72
SMPD3-201ENST00000219334 SERPINB11Q96P15 392 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 ELOVL4Q9GZR5 314 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 FBXO10Q9UK96 956 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 RUVBL2Q9Y230 463 aaKnown RBP19.54■□□□□ 0.72
SMPD3-201ENST00000219334 NFASCO94856 1347 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 DIP2CQ9Y2E4 1556 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 ERFP50548 548 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 ATP13A1Q9HD20 1204 aa19.54■□□□□ 0.72
SMPD3-201ENST00000219334 DCCP43146 1447 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 TNS2Q63HR2 1409 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 PDZK1P1A8MUH7 402 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 TCN1P20061 433 aaPredicted RBP19.53■□□□□ 0.72
SMPD3-201ENST00000219334 KBTBD12Q3ZCT8 623 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 EMC1Q8N766 993 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 APOL2Q9BQE5 337 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 RMND5AQ9H871 391 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 ZCCHC17Q9NP64 241 aaKnown RBP19.53■□□□□ 0.72
SMPD3-201ENST00000219334 MYPNQ86TC9 1320 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 RARRES1P49788 294 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 NDST1P52848 882 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 PDLIM2Q96JY6 352 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 TSPAN16Q9UKR8 245 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 RBAK-RBAKDNI3L0D1 243 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 MSH3P20585 1137 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 CNTN2Q02246 1040 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 RD3Q7Z3Z2 195 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 LPCAT1Q8NF37 534 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 SPIRE2Q8WWL2 714 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 INPP5DQ92835 1189 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 ZCCHC2Q9C0B9 1178 aaKnown RBP19.53■□□□□ 0.72
SMPD3-201ENST00000219334 EPN3Q9H201 632 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 INTS13Q9NVM9 706 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 STX5Q13190 355 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 ZPBP2Q6X784 338 aa19.53■□□□□ 0.72
SMPD3-201ENST00000219334 PAWRQ96IZ0 340 aaKnown RBP19.53■□□□□ 0.72
SMPD3-201ENST00000219334 TSPAN3O60637 253 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 DGKIO75912 1065 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 CHI3L1P36222 383 aaPredicted RBP19.52■□□□□ 0.72
SMPD3-201ENST00000219334 DEFB115Q30KQ5 88 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 CES5AQ6NT32 575 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 AGGF1Q8N302 714 aaeCLIP19.52■□□□□ 0.72
SMPD3-201ENST00000219334 TRAPPC12Q8WVT3 735 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 OLFM3Q96PB7 478 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 ADAM2Q99965 735 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 THTPAQ9BU02 230 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 FHDC1Q9C0D6 1143 aaPredicted RBP19.52■□□□□ 0.72
SMPD3-201ENST00000219334 MGAT4DA6NG13 374 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 PROSCO94903 275 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 APOA1P02647 267 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 SLC29A2Q14542 456 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 CAMKK2Q96RR4 588 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 MEGF6O75095 1541 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 UMODL1Q5DID0 1318 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 E9PCH4 1651 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 LOC100653049A0A140TA62 436 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 MYO1CO00159 1063 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 PSMD12O00232 456 aaPredicted RBP19.52■□□□□ 0.72
SMPD3-201ENST00000219334 KRT34O76011 436 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 OR1E1P30953 314 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 MAPK7Q13164 816 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 VGLL4Q14135 290 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 P3H2Q8IVL5 708 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 FBXO36Q8NEA4 188 aa19.52■□□□□ 0.72
SMPD3-201ENST00000219334 TCF3P15923 654 aa19.52■□□□□ 0.71
SMPD3-201ENST00000219334 NAA30Q147X3 362 aaPredicted RBP19.52■□□□□ 0.71
SMPD3-201ENST00000219334 SPOCD1Q6ZMY3 1216 aa19.52■□□□□ 0.71
SMPD3-201ENST00000219334 MTSS1LQ765P7 747 aa19.52■□□□□ 0.71
SMPD3-201ENST00000219334 ZDHHC17Q8IUH5 632 aa19.52■□□□□ 0.71
SMPD3-201ENST00000219334 ATG4AQ8WYN0 398 aa19.52■□□□□ 0.71
SMPD3-201ENST00000219334 ERP27Q96DN0 273 aa19.52■□□□□ 0.71
SMPD3-201ENST00000219334 ZBTB39O15060 712 aa19.52■□□□□ 0.71
SMPD3-201ENST00000219334 BEX3Q00994 111 aa19.52■□□□□ 0.71
SMPD3-201ENST00000219334 ADIGQ0VDE8 80 aa19.52■□□□□ 0.71
SMPD3-201ENST00000219334 APPL1Q9UKG1 709 aa19.52■□□□□ 0.71
SMPD3-201ENST00000219334 RASSF10A6NK89 507 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 B2RBV5 119 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 AKAP3O75969 853 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 RBP1P09455 135 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 NT5DC3Q86UY8 548 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 ABRAQ8N0Z2 381 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 CYGBQ8WWM9 190 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 FAM136AQ96C01 138 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 DCLK3Q9C098 648 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 KRCC1Q9NPI7 259 aaPredicted RBP19.51■□□□□ 0.71
SMPD3-201ENST00000219334 SPTLC1O15269 473 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 YWHAZP63104 245 aaKnown RBP19.51■□□□□ 0.71
SMPD3-201ENST00000219334 ITGA9Q13797 1035 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 DEPDC1Q5TB30 811 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 TRMT11Q7Z4G4 463 aaKnown RBP19.51■□□□□ 0.71
SMPD3-201ENST00000219334 SLC44A2Q8IWA5 706 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms