RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 EFCAB3Q8N7B9 438 aa10.04□□□□□ -0.8
TUBB1-201ENST00000217133 SHKBP1Q8TBC3 707 aa10.04□□□□□ -0.8
TUBB1-201ENST00000217133 TMEM39BQ9GZU3 492 aa10.04□□□□□ -0.8
TUBB1-201ENST00000217133 DNAAF2Q9NVR5 837 aaKnown RBP10.04□□□□□ -0.8
TUBB1-201ENST00000217133 ZDHHC7Q9NXF8 308 aa10.04□□□□□ -0.8
TUBB1-201ENST00000217133 SERPINA10Q9UK55 444 aa10.04□□□□□ -0.8
TUBB1-201ENST00000217133 TMX2Q9Y320 296 aa10.04□□□□□ -0.8
TUBB1-201ENST00000217133 A0A0B4J269 797 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 VNN1O95497 513 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 ATP5BP06576 529 aaKnown RBP10.03□□□□□ -0.8
TUBB1-201ENST00000217133 ATP6V1B1P15313 513 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 DESP17661 470 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 XIAPP98170 497 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 FOLH1Q04609 750 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 FAXCQ5TGI0 409 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 ANGEL2Q5VTE6 544 aaKnown RBP10.03□□□□□ -0.8
TUBB1-201ENST00000217133 RSPH3Q86UC2 560 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 DEFB107AQ8IZN7 70 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 PPP4R1Q8TF05 950 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 THAP1Q9NVV9 213 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 SIRPGQ9P1W8 387 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 COL20A1Q9P218 1284 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 GABBR1Q9UBS5 961 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 SORCS3Q9UPU3 1222 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 ZNF536O15090 1300 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 SPDYE2BA6NHP3 402 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 CD48P09326 243 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 SPDYE6P0CI01 402 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 POLR2BP30876 1174 aaKnown RBP10.03□□□□□ -0.8
TUBB1-201ENST00000217133 RFC1P35251 1148 aaPredicted RBP10.03□□□□□ -0.8
TUBB1-201ENST00000217133 RPL5P46777 297 aaKnown RBP10.03□□□□□ -0.8
TUBB1-201ENST00000217133 ITGA9Q13797 1035 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 TMEM259Q4ZIN3 620 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 B3GNT6Q6ZMB0 384 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 POLNQ7Z5Q5 900 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 THNSL1Q8IYQ7 743 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 SAMD3Q8N6K7 520 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 CEP70Q8NHQ1 597 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 MYOZ2Q9NPC6 264 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 SEPT9Q9UHD8 586 aaPredicted RBP10.03□□□□□ -0.8
TUBB1-201ENST00000217133 CTDP1Q9Y5B0 961 aaPredicted RBP10.03□□□□□ -0.8
TUBB1-201ENST00000217133 TEX264Q9Y6I9 313 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 KAT6AQ92794 2004 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 CXorf49A8MYA2 514 aaPredicted RBP10.03□□□□□ -0.8
TUBB1-201ENST00000217133 FZD9O00144 591 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 ADCY3O60266 1144 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 BPGMP07738 259 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 SETSIPP0DME0 302 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 SFNP31947 248 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 WNT7BP56706 349 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 KRT76Q01546 638 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 MSLNQ13421 630 aaPredicted RBP10.03□□□□□ -0.8
TUBB1-201ENST00000217133 TMED1Q13445 227 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 SH2D5Q6ZV89 423 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 EMC1Q8N766 993 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 ZNF526Q8TF50 670 aaPredicted RBP10.03□□□□□ -0.8
TUBB1-201ENST00000217133 POLR3FQ9H1D9 316 aaPredicted RBP10.03□□□□□ -0.8
TUBB1-201ENST00000217133 C17orf75Q9HAS0 396 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 PTTG2Q9NZH5 202 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 TMOD2Q9NZR1 351 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 EFR3BQ9Y2G0 817 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 PPME1Q9Y570 386 aa10.03□□□□□ -0.8
TUBB1-201ENST00000217133 CAPN8A6NHC0 703 aa10.02□□□□□ -0.8
TUBB1-201ENST00000217133 APOC4-APOC2K7ER74 178 aa10.02□□□□□ -0.8
TUBB1-201ENST00000217133 LYPLA1O75608 230 aaPredicted RBP10.02□□□□□ -0.8
TUBB1-201ENST00000217133 LSM8O95777 96 aaKnown RBP10.02□□□□□ -0.8
TUBB1-201ENST00000217133 APOC2P02655 101 aa10.02□□□□□ -0.8
TUBB1-201ENST00000217133 AOC1P19801 751 aa10.02□□□□□ -0.8
TUBB1-201ENST00000217133 OSBPP22059 807 aa10.02□□□□□ -0.8
TUBB1-201ENST00000217133 PMLP29590 882 aa10.02□□□□□ -0.8
TUBB1-201ENST00000217133 COG7P83436 770 aa10.02□□□□□ -0.8
TUBB1-201ENST00000217133 CNGA3Q16281 694 aa10.02□□□□□ -0.8
TUBB1-201ENST00000217133 SCARA5Q6ZMJ2 495 aa10.02□□□□□ -0.8
TUBB1-201ENST00000217133 NIPA1Q7RTP0 329 aa10.02□□□□□ -0.8
TUBB1-201ENST00000217133 MCF2L2Q86YR7 1114 aa10.02□□□□□ -0.8
TUBB1-201ENST00000217133 CCDC33Q8N5R6 958 aa10.02□□□□□ -0.8
TUBB1-201ENST00000217133 MCPH1Q8NEM0 835 aa10.02□□□□□ -0.8
TUBB1-201ENST00000217133 PIWIL2Q8TC59 973 aaKnown RBP10.02□□□□□ -0.8
TUBB1-201ENST00000217133 TRPM4Q8TD43 1214 aa10.02□□□□□ -0.8
TUBB1-201ENST00000217133 MSTO1Q9BUK6 570 aa10.02□□□□□ -0.8
TUBB1-201ENST00000217133 INPP5FQ9Y2H2 1132 aa10.02□□□□□ -0.8
TUBB1-201ENST00000217133 UBIAD1Q9Y5Z9 338 aa10.02□□□□□ -0.8
TUBB1-201ENST00000217133 PTPRJQ12913 1337 aa10.02□□□□□ -0.8
TUBB1-201ENST00000217133 SDR42E2A6NKP2 422 aa10.02□□□□□ -0.81
TUBB1-201ENST00000217133 H0YCG3 227 aa10.02□□□□□ -0.81
TUBB1-201ENST00000217133 UGT1A9O60656 530 aa10.02□□□□□ -0.81
TUBB1-201ENST00000217133 LRCH4O75427 683 aa10.02□□□□□ -0.81
TUBB1-201ENST00000217133 CCNE2O96020 404 aa10.02□□□□□ -0.81
TUBB1-201ENST00000217133 APRTP07741 180 aa10.02□□□□□ -0.81
TUBB1-201ENST00000217133 IL1R2P27930 398 aa10.02□□□□□ -0.81
TUBB1-201ENST00000217133 CPOXP36551 454 aa10.02□□□□□ -0.81
TUBB1-201ENST00000217133 PSMC1P62191 440 aaKnown RBP10.02□□□□□ -0.81
TUBB1-201ENST00000217133 RPL10AP62906 217 aaKnown RBP10.02□□□□□ -0.81
TUBB1-201ENST00000217133 MRPS5P82675 430 aaKnown RBP10.02□□□□□ -0.81
TUBB1-201ENST00000217133 MRPS9P82933 396 aaKnown RBP10.02□□□□□ -0.81
TUBB1-201ENST00000217133 PRKG1Q13976 671 aa10.02□□□□□ -0.81
TUBB1-201ENST00000217133 CCNIQ14094 377 aa10.02□□□□□ -0.81
TUBB1-201ENST00000217133 SEZ6Q53EL9 994 aa10.02□□□□□ -0.81
TUBB1-201ENST00000217133 FASTKD1Q53R41 847 aaKnown RBP10.02□□□□□ -0.81
TUBB1-201ENST00000217133 DPY19L2Q6NUT2 758 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms