RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 EML3Q32P44 896 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 TATDN2Q93075 761 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 ARHGEF26Q96DR7 871 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 ADGRE3Q9BY15 652 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 COL3A1P02461 1466 aaPredicted RBP14.23□□□□□ -0.13
SIX4-201ENST00000216513 SOWAHBA6NEL2 793 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 PHF20L1A8MW92 1017 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 DNTTP04053 509 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 CYP3A4P08684 503 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 RARGP13631 454 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 RAP1GDS1P52306 607 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 KLHDC7AQ5VTJ3 777 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 TSHZ1Q6ZSZ6 1077 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 ANKRD63C9JTQ0 380 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 H2AFYO75367 372 aaKnown RBP14.22□□□□□ -0.13
SIX4-201ENST00000216513 ANXA9O76027 345 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 TMC2Q8TDI7 906 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 SMAD5Q99717 465 aaKnown RBP14.22□□□□□ -0.13
SIX4-201ENST00000216513 MED4Q9NPJ6 270 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 INSL6Q9Y581 213 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 RBAK-RBAKDNI3L0D1 243 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 TRIM16O95361 564 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 MSH3P20585 1137 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 EPM2AIP1Q7L775 607 aaPredicted RBP14.22□□□□□ -0.13
SIX4-201ENST00000216513 AP4E1Q9UPM8 1137 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 KCNJ1P48048 391 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 LRRC36Q1X8D7 754 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 FAXCQ5TGI0 409 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 PITPNM3Q9BZ71 974 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 ULBP1Q9BZM6 244 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 COPS7BQ9H9Q2 264 aaPredicted RBP14.22□□□□□ -0.13
SIX4-201ENST00000216513 MGEA5O60502 916 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 MTA2O94776 668 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 OR4Q2P0C623 313 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 AMD1P17707 334 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 PMS2P54278 862 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 GRAMD1BQ3KR37 738 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 MAP3K21Q5TCX8 1036 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 ABRAQ8N0Z2 381 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 PRMT1Q99873 361 aaKnown RBP14.22□□□□□ -0.13
SIX4-201ENST00000216513 XPO7Q9UIA9 1087 aaKnown RBP14.22□□□□□ -0.13
SIX4-201ENST00000216513 ADAMTSL3P82987 1691 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 FOXN3O00409 490 aaPredicted RBP14.22□□□□□ -0.13
SIX4-201ENST00000216513 PYGLP06737 847 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 SMAD3P84022 425 aaKnown RBP14.22□□□□□ -0.13
SIX4-201ENST00000216513 USP10Q14694 798 aaKnown RBP14.22□□□□□ -0.13
SIX4-201ENST00000216513 UNKQ9C0B0 810 aaKnown RBP14.22□□□□□ -0.13
SIX4-201ENST00000216513 SOHLH2Q9NX45 425 aa14.22□□□□□ -0.13
SIX4-201ENST00000216513 SLIT3O75094 1523 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 ESRRAP11474 423 aaPredicted RBP14.21□□□□□ -0.13
SIX4-201ENST00000216513 FOSL2P15408 326 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 GEMP55040 296 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 BOLA3Q53S33 107 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 RGS9BPQ6ZS82 235 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 BRSK2Q8IWQ3 736 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.21□□□□□ -0.13
SIX4-201ENST00000216513 TISP43B9A030 160 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 C1QTNF3-AMACRE9PGA6 284 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 UGCGQ16739 394 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 KLHL38Q2WGJ6 581 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 ACAD10Q6JQN1 1059 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 FAM71DQ8N9W8 422 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 NPLOC4Q8TAT6 608 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 RXFP2Q8WXD0 754 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 ANKS1AQ92625 1134 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 BADQ92934 168 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 SELENONQ9NZV5 590 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 TNFSF13BQ9Y275 285 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 ADGRG1Q9Y653 693 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 PARP4Q9UKK3 1724 aaKnown RBP14.21□□□□□ -0.13
SIX4-201ENST00000216513 A0A1W2PQ45 241 aaPredicted RBP14.21□□□□□ -0.13
SIX4-201ENST00000216513 A0A1W2PQY0 241 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 ITGALP20701 1170 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 RPL9P32969 192 aaKnown RBP14.21□□□□□ -0.13
SIX4-201ENST00000216513 HIST2H2ACQ16777 129 aaPredicted RBP14.21□□□□□ -0.13
SIX4-201ENST00000216513 ZNF618Q5T7W0 954 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 RAP1GAP2Q684P5 730 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 HIST2H2AA3Q6FI13 130 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 NAPEPLDQ6IQ20 393 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 HAUS8Q9BT25 410 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 GOLGA2P5Q9HBQ8 144 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 CFAP97Q9P2B7 532 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 GPSM3Q9Y4H4 160 aa14.21□□□□□ -0.13
SIX4-201ENST00000216513 TBC1D3DA0A087WVF3 549 aa14.21□□□□□ -0.14
SIX4-201ENST00000216513 TBC1D3IA0A087WXS9 549 aa14.21□□□□□ -0.14
SIX4-201ENST00000216513 TBC1D3EA0A087X179 549 aa14.21□□□□□ -0.14
SIX4-201ENST00000216513 TBC1D3KA0A087X1G2 549 aa14.21□□□□□ -0.14
SIX4-201ENST00000216513 TBC1D3FA6NER0 549 aaPredicted RBP14.21□□□□□ -0.14
SIX4-201ENST00000216513 TBC1D3LB9A6J9 549 aa14.21□□□□□ -0.14
SIX4-201ENST00000216513 MTSS1O43312 755 aa14.21□□□□□ -0.14
SIX4-201ENST00000216513 SRP72O76094 671 aaKnown RBP14.21□□□□□ -0.14
SIX4-201ENST00000216513 TBC1D3HP0C7X1 549 aa14.21□□□□□ -0.14
SIX4-201ENST00000216513 RPL17P18621 184 aaKnown RBP14.21□□□□□ -0.14
SIX4-201ENST00000216513 TBC1D3GQ6DHY5 549 aa14.21□□□□□ -0.14
SIX4-201ENST00000216513 TBC1D3CQ6IPX1 549 aa14.21□□□□□ -0.14
SIX4-201ENST00000216513 TBC1D3Q8IZP1 549 aaPredicted RBP14.21□□□□□ -0.14
SIX4-201ENST00000216513 KRT35Q92764 455 aa14.21□□□□□ -0.14
SIX4-201ENST00000216513 ABTB1Q969K4 478 aaPredicted RBP14.21□□□□□ -0.14
SIX4-201ENST00000216513 GIMAP4Q9NUV9 329 aa14.21□□□□□ -0.14
SIX4-201ENST00000216513 LNPEPQ9UIQ6 1025 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms