RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 FGFR3P22607 806 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 CTCFP49711 727 aaPredicted RBP20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 MRPL58Q14197 206 aaKnown RBP20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 SLC25A52Q3SY17 297 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 BOLA3Q53S33 107 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 DUPD1Q68J44 220 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 EIF1ADQ8N9N8 165 aaKnown RBP20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 TRIM43Q96BQ3 446 aaPredicted RBP20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 SLC2A13Q96QE2 648 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 TRIM31Q9BZY9 425 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 PRDM5Q9NQX1 630 aaPredicted RBP20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 PCDH10Q9P2E7 1040 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 RASAL2Q9UJF2 1139 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 COL4A4P53420 1690 aaPredicted RBP20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 ZBED1O96006 694 aa20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 FYNP06241 537 aa20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 CSF2RAP15509 400 aa20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 CYP2F1P24903 491 aa20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 NOS2P35228 1153 aa20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 ARSEP51690 589 aa20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 CDH6P55285 790 aa20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 SYPL2Q5VXT5 272 aa20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 STRADAQ7RTN6 431 aa20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 BHLHA9Q7RTU4 235 aa20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 TEKT4Q8WW24 435 aa20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 CALN1Q9BXU9 219 aa20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 DPH5Q9H2P9 285 aa20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 GREB1Q4ZG55 1949 aa20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 MDM4O15151 490 aa20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 ECEL1O95672 775 aa20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 HSPA1AP0DMV8 641 aaKnown RBP20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 HSPA1BP0DMV9 641 aaKnown RBP20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 PITX1P78337 314 aaPredicted RBP20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 OTUD1Q5VV17 481 aaPredicted RBP20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 BCL7CQ8WUZ0 217 aaPredicted RBP20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 SNRNP25Q9BV90 132 aaKnown RBP20.53■□□□□ 0.88
TNFRSF1A-201ENST00000162749 DPYSL3Q14195 570 aa20.52■□□□□ 0.88
TNFRSF1A-201ENST00000162749 HLTFQ14527 1009 aaKnown RBP eCLIP20.52■□□□□ 0.88
TNFRSF1A-201ENST00000162749 CTXN3Q4LDR2 81 aa20.52■□□□□ 0.88
TNFRSF1A-201ENST00000162749 ZC3H12AQ5D1E8 599 aaKnown RBP20.52■□□□□ 0.88
TNFRSF1A-201ENST00000162749 ALS2CLQ60I27 953 aa20.52■□□□□ 0.88
TNFRSF1A-201ENST00000162749 BNIPLQ7Z465 357 aa20.52■□□□□ 0.88
TNFRSF1A-201ENST00000162749 DCP1BQ8IZD4 617 aaKnown RBP20.52■□□□□ 0.88
TNFRSF1A-201ENST00000162749 NPY6RQ99463 290 aa20.52■□□□□ 0.88
TNFRSF1A-201ENST00000162749 TMEM106CQ9BVX2 250 aa20.52■□□□□ 0.88
TNFRSF1A-201ENST00000162749 NEUROG2Q9H2A3 272 aa20.52■□□□□ 0.88
TNFRSF1A-201ENST00000162749 ALPK3Q96L96 1907 aa20.52■□□□□ 0.88
TNFRSF1A-201ENST00000162749 KIAA0355O15063 1070 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 SULT1E1P49888 294 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 RTP2Q5QGT7 225 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 PM20D1Q6GTS8 502 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ZNF280DQ6N043 979 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 BBS12Q6ZW61 710 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 TOP1MTQ969P6 601 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 FAM114A2Q9NRY5 505 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 GPATCH2LQ9NWQ4 482 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ABI2Q9NYB9 513 aaPredicted RBP20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 STAP1Q9ULZ2 295 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 NAALADL1Q9UQQ1 740 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 USP3Q9Y6I4 520 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ABHD14A-ACY1A0A1B0GW23 586 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 CST8O60676 142 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 HNRNPH2P55795 449 aaKnown RBP20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 DYNLT1P63172 113 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ELAVL2Q12926 359 aaKnown RBP20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 MMRN1Q13201 1228 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 NFE2Q16621 373 aaPredicted RBP20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 CA9Q16790 459 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 IQCKQ8N0W5 287 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 MREGQ8N565 214 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ATL2Q8NHH9 583 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 HAUS1Q96CS2 278 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 FUBP3Q96I24 572 aaKnown RBP eCLIP20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ZIM3Q96PE6 472 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 DNPEPQ9ULA0 475 aa20.51■□□□□ 0.87
TNFRSF1A-201ENST00000162749 LIASO43766 372 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 LTFP02788 710 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 RAG1P15918 1043 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 CAPN2P17655 700 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 GRIK1P39086 918 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ALDH7A1P49419 539 aaKnown RBP20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 DRG2P55039 364 aaKnown RBP20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 KRT17Q04695 432 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 ERMARDQ5T6L9 678 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 TMCO2Q7Z6W1 182 aaPredicted RBP20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 SCAMP5Q8TAC9 235 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 GRK7Q8WTQ7 553 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 PIK3R5Q8WYR1 880 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 CCDC114Q96M63 670 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 CWH43Q9H720 699 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 PLXNA3P51805 1871 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 CAPN9O14815 690 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 IL4RP24394 825 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 BYSLQ13895 437 aaKnown RBP20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 PDK2Q15119 407 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 PPP1R7Q15435 360 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 DRICH1Q6PGQ1 229 aaPredicted RBP20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 SCML4Q8N228 414 aa20.5■□□□□ 0.87
TNFRSF1A-201ENST00000162749 CCDC185Q8N715 623 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms