RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 CKMP06732 381 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 IRF1P10914 325 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 LAMP2P13473 410 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 BMP1P13497 986 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 FCARP24071 287 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 VIPR2P41587 438 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 GABRB2P47870 512 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 PITX1P78337 314 aaPredicted RBP10.55□□□□□ -0.72
CD9-201ENST00000009180 ZP2Q05996 745 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 MTF1Q14872 753 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 ASTE1Q2TB18 679 aaPredicted RBP10.55□□□□□ -0.72
CD9-201ENST00000009180 C10orf120Q5SQS8 335 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 HECTD3Q5T447 861 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 SNX30Q5VWJ9 437 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 BSPRYQ5W0U4 402 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 BTBD8Q5XKL5 378 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 OTOP3Q7RTS5 596 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 VPS36Q86VN1 386 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 TMEM139Q8IV31 216 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.55□□□□□ -0.72
CD9-201ENST00000009180 MCOLN2Q8IZK6 566 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 CMTM8Q8IZV2 173 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 SCML4Q8N228 414 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 ARHGAP18Q8N392 663 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 MSANTD4Q8NCY6 345 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 RIN3Q8TB24 985 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 ATXN2LQ8WWM7 1075 aaKnown RBP10.55□□□□□ -0.72
CD9-201ENST00000009180 KHSRPQ92945 711 aaKnown RBP eCLIP10.55□□□□□ -0.72
CD9-201ENST00000009180 ASB16Q96NS5 453 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 NECAB3Q96P71 396 aaPredicted RBP10.55□□□□□ -0.72
CD9-201ENST00000009180 KXD1Q9BQD3 176 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 RNF38Q9H0F5 515 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 TASP1Q9H6P5 420 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 METTL5Q9NRN9 209 aaKnown RBP10.55□□□□□ -0.72
CD9-201ENST00000009180 SMPD4Q9NXE4 827 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 RASAL2Q9UJF2 1139 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 NAALADL1Q9UQQ1 740 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 FAM50BQ9Y247 325 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 CCL26Q9Y258 94 aa10.55□□□□□ -0.72
CD9-201ENST00000009180 CUL9Q8IWT3 2517 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 ZNF638Q14966 1978 aaKnown RBP10.54□□□□□ -0.72
CD9-201ENST00000009180 SSU72P8A0A1W2PR75 194 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 ZNF263O14978 683 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 AKR1B10O60218 316 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 RTN2O75298 545 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 OLFM2O95897 454 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 ASGR2P07307 311 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 HMBSP08397 361 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 HDCP19113 662 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 ABCB4P21439 1286 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 FECHP22830 423 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 RRM1P23921 792 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 DDX6P26196 483 aaKnown RBP eCLIP10.54□□□□□ -0.72
CD9-201ENST00000009180 PPP3CCP48454 512 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 RNASE9P60153 205 aaKnown RBP10.54□□□□□ -0.72
CD9-201ENST00000009180 ZXDBP98169 803 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 CDK17Q00537 523 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 SLC6A3Q01959 620 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 EFEMP1Q12805 493 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 SLC18A3Q16572 532 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 CCDC122Q5T0U0 273 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 SYPL2Q5VXT5 272 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 TANGO2Q6ICL3 276 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 TRNP1Q6NT89 227 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 PARM1Q6UWI2 310 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 RAD9BQ6WBX8 426 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 TOGARAM2Q6ZUX3 1019 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 RSRC2Q7L4I2 434 aaKnown RBP10.54□□□□□ -0.72
CD9-201ENST00000009180 SLC26A9Q7LBE3 791 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 MIB1Q86YT6 1006 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 ARID3BQ8IVW6 561 aaPredicted RBP10.54□□□□□ -0.72
CD9-201ENST00000009180 ADHFE1Q8IWW8 467 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 DEFB106AQ8N104 65 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 EMC1Q8N766 993 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 JOSD2Q8TAC2 188 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 ADAM32Q8TC27 787 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 RSAD2Q8WXG1 361 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 FGF14Q92915 247 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 SMARCD2Q92925 531 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 USP13Q92995 863 aaPredicted RBP10.54□□□□□ -0.72
CD9-201ENST00000009180 WBP2Q969T9 261 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 ZNF653Q96CK0 615 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 ACSF2Q96CM8 615 aaPredicted RBP10.54□□□□□ -0.72
CD9-201ENST00000009180 ARHGEF26Q96DR7 871 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 ZFRQ96KR1 1074 aaKnown RBP10.54□□□□□ -0.72
CD9-201ENST00000009180 RPP25Q9BUL9 199 aaKnown RBP10.54□□□□□ -0.72
CD9-201ENST00000009180 PACSIN1Q9BY11 444 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 PLA2G2FQ9BZM2 168 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 NACA2Q9H009 215 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 ISCUQ9H1K1 167 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 WDR70Q9NW82 654 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 CLIC5Q9NZA1 410 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.54□□□□□ -0.72
CD9-201ENST00000009180 GDE1Q9NZC3 331 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 MYO1AQ9UBC5 1043 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 LIMD1Q9UGP4 676 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 USTQ9Y2C2 406 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 CPQQ9Y646 472 aa10.54□□□□□ -0.72
CD9-201ENST00000009180 TCRBV5S1A1TA0A578 114 aa10.53□□□□□ -0.72
CD9-201ENST00000009180 GOLGA6L6A8MZA4 724 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms