RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Cul2Q9D4H8 745 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ten1Q9D7K2 161 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Rpn2Q9DBG6 631 aaKnown RBP14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Orc1Q9Z1N2 840 aaKnown RBP14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Zfp142G5E869 1843 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Pdzd8B9EJ80 1147 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Stt3bQ3TDQ1 823 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Scarf1Q5ND28 820 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Fam167aQ6P1G6 215 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 PolnQ7TQ07 864 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Katnal2Q9D3R6 539 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Usp29Q9ES63 869 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Abca15E9PWH4 1668 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ltbp4Q8K4G1 1666 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Mfsd14aP70187 490 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 CkbQ04447 381 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Mcm9Q2KHI9 1134 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ccdc127Q3TC33 260 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Cyp2c66Q5GLZ0 490 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 TxlngQ8BHN1 524 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Bri3bpQ8BXV2 253 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Bclaf1Q8K019 919 aaKnown RBP14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Uts2Q9QZQ3 123 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Fcer2P20693 331 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Pax3P24610 479 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Hsd17b4P51660 735 aaKnown RBP14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Polr1bP70700 1135 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 TraddQ3U0V2 310 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Capn11Q6J756 714 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Scd4Q6T707 353 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Tmc8Q7TN58 722 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 ThtpaQ8JZL3 224 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Atp6v1b1Q91YH6 513 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Lpin2Q99PI5 893 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Trpc7Q9WVC5 862 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 C130060K24RikG3UWA8 416 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Pick1Q62083 416 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Sema4bQ62179 823 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 ChpfQ6IQX7 774 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Gm7247Q6UY52 187 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Wdr91Q7TMQ7 748 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ahcyl1Q80SW1 530 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ttc39bQ8BYY4 617 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Gm21973F6WEZ7 68 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Rrm1P07742 792 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Calb2Q08331 271 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ndst1Q3UHN9 882 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Etaa1Q5SVT3 877 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Tas2r125Q7M710 311 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 C6.1alQ7M757 291 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Gcfc2Q8BKT3 769 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Pkn2Q8BWW9 983 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Hdac11Q91WA3 347 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Nsmce3Q9CPR8 279 aa14.29□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 1700031M16RikA0A087WSH0 82 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Gm7694J3QNH8 270 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ets2P15037 468 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Eno3P21550 434 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 GsapQ3TCV3 858 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Phlda1Q62392 405 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Gpr151Q7TSN6 422 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Trim36Q80WG7 729 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ccser1Q8C0C4 895 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Tbc1d13Q8R3D1 400 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Fam122aQ9DB52 284 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Sfmbt1Q9JMD1 863 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Hao1Q9WU19 370 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Dhx35A2ACQ1 703 aaKnown RBP14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ext2P70428 718 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 XiapQ60989 496 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Wscd1Q80XH4 572 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 B3galnt2Q8BG28 504 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Oas1dQ8VI95 361 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Pcdhb11Q91UZ8 797 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Lsm7Q9CQQ8 103 aaKnown RBP14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ly6iQ9WU67 134 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Rgs2O08849 211 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Tnfaip1O70479 316 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 IppP28575 584 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Casp4P70343 373 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Rgl2Q61193 778 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Zfp566Q8VCI1 386 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Satb2Q8VI24 733 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Pcdha3Q91Y16 942 aa14.28□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 1700024B05RikE9Q6D7 167 aa14.27□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Kifc3O35231 824 aa14.27□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 S100a9P31725 113 aa14.27□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Lzts1P60853 599 aa14.27□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 YwhahP68510 246 aaKnown RBP14.27□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Rbm20Q3UQS8 1199 aaKnown RBP14.27□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 CttnQ60598 546 aaKnown RBP14.27□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Tmcc1Q69ZZ6 649 aa14.27□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Mtmr10Q7TPM9 771 aa14.27□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Lrrc15Q80X72 579 aa14.27□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Il33Q8BVZ5 266 aa14.27□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Phactr3Q8BYK5 558 aa14.27□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Bag5Q8CI32 447 aa14.27□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Mta1Q8K4B0 715 aaKnown RBP14.27□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ndufa10Q99LC3 355 aaKnown RBP14.27□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Fbxo32Q9CPU7 355 aa14.27□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms