RNA–Protein interactions for RNA: ENSMUST00000173243.7

Ccdc28a-203, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-203ENSMUST00000173243 Ppa2Q91VM9 330 aa12.8□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Twf1Q91YR1 350 aaKnown RBP12.8□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Asb11Q9CQ31 323 aa12.8□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Sgf29Q9DA08 293 aaKnown RBP12.8□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 NumbQ9QZS3 653 aa12.8□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Slc2a5Q9WV38 501 aa12.8□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 PtprdQ64487 1912 aa12.8□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Mki67E9PVX6 3177 aaKnown RBP12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 EloblA6PWE0 161 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Trim30cD3YVI9 513 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Nedd9O35177 833 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Tnk2O54967 1055 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Kcnu1O54982 1121 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Ap2a2P17427 938 aaKnown RBP12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 TankP70347 448 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Wbp1P97764 304 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 GscQ02591 256 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Q3UE31 404 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Taar7eQ5QD09 358 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Creb3Q61817 404 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Ovgp1Q62010 721 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Ggnbp1Q6K1E7 370 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Bfsp2Q6NVD9 416 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Adat2Q6P6J0 191 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Znf821Q6PD05 413 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Dnph1Q80VJ3 173 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 C2cd2lQ80X80 706 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Rnf214Q8BFU3 668 aaKnown RBP12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Arid5bQ8BM75 1188 aaKnown RBP12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 LarsQ8BMJ2 1178 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 DrgxQ8BYH0 263 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Thop1Q8C1A5 687 aaKnown RBP12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Parp10Q8CIE4 960 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Lrrc45Q8CIM1 670 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Vmn1r188Q8K3N2 308 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Ccdc9Q8VC31 543 aaKnown RBP12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Atp1a1Q8VDN2 1023 aaKnown RBP12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Zdhhc5Q8VDZ4 715 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Mettl13Q91YR5 698 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Rilpl2Q99LE1 197 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 CatsperzQ9CQP8 194 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 SgshQ9EQ08 502 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 PapolbQ9WVP6 641 aa12.79□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Scn8aQ9WTU3 1978 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Cacna1hO88427 2365 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Vps13aQ5H8C4 3166 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Zfp626A0A0U1RQ84 676 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Vsig10l2A0A140LHF2 776 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Gm13089A2AGW7 455 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Gm4297D3YWB7 211 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Spryd3E9Q9B3 442 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Sclt1G5E861 688 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Folr1P35846 255 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Dsc3P55850 896 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Eef1dP57776 281 aaKnown RBP12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Foxp2P58463 714 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Specc1lQ2KN98 1118 aaKnown RBP12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 HarsQ61035 509 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 MmeQ61391 750 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Pacsin1Q61644 441 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Jak2Q62120 1129 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Naif1Q6PFD7 327 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Lats2Q7TSJ6 1042 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Clec2eQ80XD9 204 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Ankrd52Q8BTI7 1076 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Svs3bQ8BZH8 265 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Sit1Q8C503 180 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Tmem132cQ8CEF9 1099 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Bzw2Q91VK1 419 aaKnown RBP12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Usp3Q91W36 520 aaKnown RBP12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Pcdhgb1Q91XX8 918 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Ndufb5Q9CQH3 189 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Mdm1Q9D067 708 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Syt10Q9R0N4 523 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 Kat6aQ8BZ21 2003 aa12.78□□□□□ -0.36
Ccdc28a-203ENSMUST00000173243 A930018M24RikB7ZMY3 218 aa12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 D3Z070 196 aa12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 Gprin2D3Z1D7 455 aa12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 Hnrnph3D3Z3N4 346 aaKnown RBP12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 Gm8113E0CXS8 587 aa12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 Gm973E9Q295 1059 aa12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 Zbtb11G5E8B9 1050 aaKnown RBP12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 Ebf3O08791 596 aa12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 Cdk14O35495 469 aa12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 Ly6aP05533 134 aa12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 Nfkb1P25799 971 aa12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 Xrcc5P27641 732 aa12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 Ptger3P30557 365 aa12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 Mxi1P50540 228 aa12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 CebpzP53569 1052 aaKnown RBP12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 YwhazP63101 245 aaKnown RBP12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 VegfcP97953 415 aa12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 Cfap157Q0VFX2 523 aa12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 Mrpl10Q3TBW2 262 aaKnown RBP12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 Muc3aQ3U5A2 218 aa12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 Ceacam5Q3UKK2 947 aa12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 BC051142Q3V0M8 400 aa12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 Slc6a4Q60857 630 aa12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 Mef2dQ63943 514 aa12.77□□□□□ -0.37
Ccdc28a-203ENSMUST00000173243 KaznQ69ZS8 779 aa12.77□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms