RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Pdcd4Q61823 469 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Clec7aQ6QLQ4 244 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Ccdc154Q6RUT8 657 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Pdzph1Q8BGR1 1238 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Cabcoco1Q8CDT7 208 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 OafQ8QZR4 282 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 HnrnpabQ99020 285 aaKnown RBP12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Bbs2Q9CWF6 721 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Gm3460E9QAI8 215 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 DffaO54786 331 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Ppargc1aO70343 797 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Got1P05201 413 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Sycp3P70281 254 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Ogfod1Q3U0K8 545 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Frmd8Q3UFK8 466 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Tcf12Q61286 706 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Trim47Q8C0E3 641 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 PaoxQ8C0L6 504 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 AdigQ8R400 80 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Ppp1r16bQ8VHQ3 568 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 NpntQ91V88 561 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Scyl1Q9EQC5 806 aaKnown RBP12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Bcl9Q9D219 1425 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 SmoktcrA2KF29 484 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Zfp362B1ASA5 418 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Gm3893E9Q1I1 302 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Gria2P23819 883 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Nedd8P29595 81 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Ntrk1Q3UFB7 799 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 CamkvQ3UHL1 512 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Dupd1Q8BK84 215 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Rmdn2Q8BSE0 410 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Rhpn2Q8BWR8 686 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Ano4Q8C5H1 955 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Lsm14aQ8K2F8 462 aaKnown RBP12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Appl2Q8K3G9 662 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Sf3b3Q921M3 1217 aaKnown RBP12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Dpp3Q99KK7 738 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Itgb3bpQ9CQ82 176 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Caln1Q9JJG7 219 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Trpc3Q9QZC1 836 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Pole2O54956 527 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Rhox6O70238 227 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Mpp3O88910 568 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Epb41P48193 858 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Rhbdf2Q80WQ6 827 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Slc38a7Q8BWH0 463 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Dcun1d2Q8BZJ7 259 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Ddx28Q9CWT6 540 aaKnown RBP12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Echdc3Q9D7J9 300 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 PgdQ9DCD0 483 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Arid3bQ9Z1N7 568 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Sucla2Q9Z2I9 463 aa12.73□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Gm3752A6NAT4 150 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Taf4E9QAP7 1042 aaKnown RBP12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Hcn3O88705 779 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Fgfr4Q03142 799 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Q5EBG8 199 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Proser1Q5PRE5 913 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Supt20hQ7TT00 530 aaKnown RBP12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Pex26Q8BGI5 305 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Epb41l5Q8BGS1 731 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Klhl11Q8CE33 709 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Trim32Q8CH72 655 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Slc51aQ8R000 340 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Olfr1361Q8VFH0 317 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Pcdhga4Q91XY4 930 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Tmem246Q91YV9 403 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Ccdc77Q9CZH8 489 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Stk19Q9JHN8 254 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Zscan4eA0A1B0GRE8 505 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Olfr671A0A1B0GSN5 317 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Il12bP43432 335 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 PrkcqQ02111 707 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Zscan2Q07230 614 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 StimateQ3UF25 288 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Ece1Q4PZA2 769 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Srrm1Q52KI8 946 aaKnown RBP12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Ccdc117Q6PB51 277 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Nrde2Q80XC6 1172 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Slc36a3Q811P0 477 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Adgra1Q8C4G9 578 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Pgm2l1Q8CAA7 621 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Ttc4Q8R3H9 386 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Crtc3Q91X84 619 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 DenrQ9CQJ6 198 aaKnown RBP12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Olfr703Q9EPF5 319 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Spag4Q9JJF2 443 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Rfx5Q9JL61 658 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 1600015I10RikE9Q745 711 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Gm340F6RGI3 1242 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 MafgO54790 162 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Kcnj2P35561 428 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Gas7Q60780 421 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Fbxo11Q7TPD1 930 aaKnown RBP12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Rsl1d1Q8BVY0 452 aaKnown RBP12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Slx1bQ8BX32 270 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Tp53bp2Q8CG79 1128 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Snapc1Q8K0S9 389 aa12.72□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Oxnad1Q8VE38 311 aa12.72□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms