RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Gm5936A2BG95 728 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Gm5640A3KG49 728 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Rap1gds1E9Q912 607 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Gm21962L7N280 338 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Banf1O54962 89 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Glud1P26443 558 aaKnown RBP16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Dynlt1P51807 113 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Trim38Q5SZ99 471 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 NcaphQ8C156 731 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Pkn3Q8K045 878 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Pcdhb6Q91XZ4 772 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 1700109H08RikQ9D9C0 210 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Ppp1r12aQ9DBR7 1029 aaKnown RBP16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Fbxo17Q9QZM8 286 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Msl3Q9WVG9 525 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Cacna2d3Q9Z1L5 1091 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Fam81bA0A140LI28 432 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 C87414E9PWI7 475 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Zfp384E9Q1A5 584 aaKnown RBP16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Cyp4f40G3UW81 524 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Pim1P06803 397 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Fgfr1P16092 822 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Itga1Q3V3R4 1179 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Ifnl2Q4VK74 193 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Polr2eQ80UW8 210 aaKnown RBP16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Efcab14Q8BGQ6 484 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 RragcQ99K70 398 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 CactinQ9CS00 772 aaKnown RBP16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 TarsQ9D0R2 722 aaKnown RBP16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Sf3a3Q9D554 501 aaKnown RBP16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Atg7Q9D906 698 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 PrccQ9EQC8 491 aaKnown RBP16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 March10E9PX79 788 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Capn6O35646 641 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 HpdP49429 393 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Tdrd5Q5VCS6 1040 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Rnf168Q80XJ2 565 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Fam163bQ8BUM6 167 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Klc4Q9DBS5 619 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Timp4Q9JHB3 224 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Fkbp1bQ9Z2I2 108 aa16.51■□□□□ 0.23
Trim39-203ENSMUST00000113706 Pate3B3GLJ3 98 aa16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Ppp1r36D3Z0R2 411 aa16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Cacna2d1O08532 1103 aa16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Rpl22P67984 128 aaKnown RBP16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Mrgprx2Q3UG50 352 aa16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Slc5a10Q5SWY8 596 aa16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Acbd5Q5XG73 508 aa16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Nlrp4eQ66X19 978 aa16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Dusp11Q6NXK5 321 aaKnown RBP16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Xlr3bQ6P205 226 aa16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Tmc8Q7TN58 722 aa16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Zswim5Q80TC6 1188 aa16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Rnf112Q96DY5 654 aa16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 St13Q99L47 371 aaKnown RBP16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Slc25a19Q9DAM5 318 aa16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 PfkpQ9WUA3 784 aaKnown RBP16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Map2k5Q9WVS7 448 aa16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Gm8369E9PZI3 166 aa16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 TpteG5E8H5 664 aa16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Brcc3P46737 291 aa16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Nt5dc3Q3UHB1 546 aa16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Pld5Q3UNN8 536 aa16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Nlrp14Q6B966 993 aa16.5■□□□□ 0.23
Trim39-203ENSMUST00000113706 Pde6bP23440 856 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 B3gat3P58158 335 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 SobpQ0P5V2 864 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 PkdccQ5RJI4 492 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Pth2rQ91V95 546 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Ddx1Q91VR5 740 aaKnown RBP16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Twf1Q91YR1 350 aaKnown RBP16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Atp6v1e2Q9D593 226 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 DmgdhQ9DBT9 869 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Cep85lA0A1W2P884 806 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 1700001O22RikA2APZ1 375 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 JrklB2RRL2 523 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Shoc2O88520 582 aaKnown RBP16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Slc10a3P21129 473 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Hoxd10P28359 340 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 InscQ3HNM7 579 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Slc38a5Q3U1J0 479 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Psg28Q4KL66 472 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 CttnQ60598 546 aaKnown RBP16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 AgpsQ8C0I1 645 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Zmiz2Q8CIE2 920 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Haus3Q8QZX2 570 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Akr1c14Q91WT7 323 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Pcdha11Q91Y19 950 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Vwa7Q9JHA8 891 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Wdr46Q9Z0H1 622 aaKnown RBP16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Bnip3lQ9Z2F7 218 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Dock3Q8CIQ7 2027 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Vwa5b1A9Z1V5 1215 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 P01644 108 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 P01645 108 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 P01646 108 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 P01647 108 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Faf2Q3TDN2 445 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Mxd4Q60948 209 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Tas2r102Q7M717 329 aa16.49■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms