RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Cyp2c29Q64458 490 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Scd4Q6T707 353 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Ccser1Q8C0C4 895 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 BfarQ8R079 450 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 GarsQ9CZD3 729 aaKnown RBP16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Prmt2Q9R144 448 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Casz1Q9CWL2 1761 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Tas2r125Q7M710 311 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Gtse1Q8R080 741 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Drg2Q9QXB9 364 aaKnown RBP16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Znf638Q61464 1960 aaKnown RBP16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 EvplQ9D952 2035 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Mfsd14aP70187 490 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Slc24a2Q14BI1 711 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Letm2Q7TNU7 480 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Mcph1Q7TT79 822 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Kirrel3Q8BR86 778 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Appl1Q8K3H0 707 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Mccc1Q99MR8 717 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Mettl16Q9CQG2 553 aaKnown RBP16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Ppp1r12aQ9DBR7 1029 aaKnown RBP16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Chst7Q9EP78 484 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Hmgxb3G3X9M3 1254 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Odc1P00860 461 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Ets2P15037 468 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Zfy2P20662 777 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Mmp13P33435 472 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Grid1Q61627 1009 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Sh3gl2Q62420 352 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Tigd4Q8BUZ3 513 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Map1sQ8C052 973 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Abcf3Q8K268 709 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Usp26Q99MX1 835 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Q9D937 123 aaKnown RBP16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Kcnq2Q9Z351 759 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Pitpnm2Q6ZPQ6 1335 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Plekhg4A0A1L1SU27 1217 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Srpk1O70551 648 aaKnown RBP16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Gnat1P20612 350 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 MafP54843 370 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Olfr615Q8VGY4 313 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Ndufa10Q99LC3 355 aaKnown RBP16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Ccdc103Q9D9P2 237 aa16.05■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Olfr743L7N1Y2 311 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Capn6O35646 641 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 NrlP54846 237 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Slitrk1Q810C1 696 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Znf879Q8BI99 563 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Frmd4aQ8BIE6 1020 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Ticam2Q8BJQ4 232 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Ddx18Q8K363 660 aaKnown RBP16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 GhdcQ99J23 532 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Kifc1Q9QWT9 674 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 RptorQ8K4Q0 1335 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Banf1O54962 89 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 CrymO54983 313 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Il1rapl1P59823 695 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Irf6P97431 467 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Samd11Q1RNF8 542 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Tpp2Q64514 1262 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Kcns3Q8BQZ8 491 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Ano4Q8C5H1 955 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Abtb1Q99LJ2 478 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Acnat1A2AKK5 416 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Nek2O35942 443 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Atp6v1b2P62814 511 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Pi4k2aQ2TBE6 479 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Fam120bQ6RI63 786 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Kdm1bQ8CIG3 826 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Q91Z58 1206 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Ttc30a1Q99J38 664 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Zfp64Q99KE8 643 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Q9D4A5 307 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Slxl1Q9D515 155 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 TnfP06804 235 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Cyp2b10P12791 500 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Pkn1P70268 946 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Gcnt3Q5JCT0 437 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Cadm1Q8R5M8 456 aaKnown RBP16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Tmprss4Q8VCA5 435 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 MkksQ9JI70 570 aa16.04■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Raph1F2Z3U3 1266 aa16.03■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 CidebO70303 219 aa16.03■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 ChrngP04760 519 aa16.03■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Il2rbP16297 539 aa16.03■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Ulk3Q3U3Q1 472 aa16.03■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Ttc9Q3V038 219 aa16.03■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Shroom1Q5SX79 823 aa16.03■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Xpnpep1Q6P1B1 623 aa16.03■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Elmo2Q8BHL5 732 aa16.03■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Bri3bpQ8BXV2 253 aa16.03■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Castor2Q8CAB8 329 aa16.03■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Oas1dQ8VI95 361 aa16.03■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Zfp990B1AVN5 605 aa16.03■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Gm3248K7N721 186 aa16.03■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Cd70O55237 195 aa16.03■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Ptprn2P80560 1001 aa16.03■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Sdr16c6Q05A13 316 aa16.03■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Fam8a1Q3URQ4 399 aa16.03■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Pik3r5Q5SW28 871 aa16.03■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms