RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Ttc23lA6H6E9 458 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 MybP06876 636 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Pgk2P09041 417 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 C1orf109Q499E6 217 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Grm6Q5NCH9 871 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Foxn1Q61575 648 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Wee2Q66JT0 555 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Nup107Q8BH74 926 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Agap3Q8VHH5 910 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Lrrc40Q9CRC8 602 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Pop5Q9DB28 169 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 S100zB9EJL3 99 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Gm8298J3QPI0 401 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Cpa3P15089 417 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Gpr141Q7TQP0 305 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Usp1Q8BJQ2 784 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Mrto4Q9D0I8 239 aaKnown RBP10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 TprnA2AI08 749 aaKnown RBP10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 PolP11369 1281 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 BC051142Q3V0M8 400 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Thnsl1Q8BH55 747 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Taf6lQ8R2K4 616 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Dctn3Q9Z0Y1 186 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Gm3893E9Q1I1 302 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Tnfrsf11bO08712 401 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Ass1P16460 412 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Gp1bbP56400 206 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Snap25P60879 206 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Coq7P97478 217 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Plk1Q07832 603 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Usp7Q6A4J8 1103 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Samd4bQ80XS6 687 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Mrpl9Q99N94 265 aaKnown RBP10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Maged2Q9ER67 616 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Skp1Q9WTX5 163 aa10.76□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Unc13bQ9Z1N9 1602 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Atf6F6VAN0 656 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Ncam2O35136 837 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Vars2Q3U2A8 1060 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Esyt3Q5DTI8 891 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Myl12aQ6ZWQ9 172 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Rxfp2Q91ZZ5 737 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 MtrexQ9CZU3 1040 aaKnown RBP10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Mmp20P57748 482 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Krt76Q3UV17 594 aaKnown RBP10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Usp50Q6P8X6 390 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Stk40Q7TNL3 435 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Nsun6Q7TS68 476 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Rd3Q8BRE0 195 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Gtse1Q8R080 741 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Gpatch1Q9DBM1 930 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Gm28168A0A087WNP1 180 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Gm5072A2AHM1 344 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Atp8b5A3FIN4 1183 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Sfr1Q8BP27 319 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Pex5lQ8C437 567 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 MsraQ9D6Y7 233 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Mms22lB1AUR6 1238 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Pabpc1P29341 636 aaKnown RBP10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Mrps31Q61733 384 aaKnown RBP10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Sh3gl2Q62420 352 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Ubxn7Q6P5G6 467 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Spice1Q8C804 860 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Spdye4bQ8CDE8 236 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Nsl1Q8K305 281 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Pla2g12bQ99P27 195 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Dnajc5bQ9CQ94 199 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Shmt1P50431 478 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 CstaP56567 97 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 VwdeQ6DFV8 926 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Aste1Q8BIR2 672 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Mettl21cQ8BLU2 248 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Pkn2Q8BWW9 983 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Rps6kl1Q8R2S1 544 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Ccdc81Q9D5W4 654 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Dmap1Q9JI44 468 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Gm3252E9PUT9 216 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Gm2956E9PVJ0 216 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Gm3002E9PW72 216 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Gm3468E9QAJ8 216 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Gm8108K7N734 216 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Gm3739L7N296 216 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Gm3164L7N2B9 238 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Gm3488M0QW81 238 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 SykP48025 629 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Scrn3Q3TMH2 418 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Afg1lQ3V384 480 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Ankzf1Q80UU1 748 aaKnown RBP10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 BC048507Q80ZS7 89 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Pi4kbQ8BKC8 816 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Fam83aQ8K2P2 436 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Ndufv1Q91YT0 464 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Trim8Q99PJ2 551 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Btbd18A0A0A6YY25 723 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Ifi213D3Z5G0 586 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Tnk2O54967 1055 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Klra1P20937 262 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Akr1b7P21300 316 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Mon1aQ6PDG8 556 aa10.75□□□□□ -0.69
Scn8a-201ENSMUST00000082209 Mrpl2Q9D773 306 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms