RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Lima1Q9ERG0 753 aaKnown RBP10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Tmem59Q9QY73 323 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Pdpk1Q9Z2A0 559 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Sh3pxd2bA2AAY5 908 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Gimd1E9PW74 217 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Speer4f2E9Q366 295 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Zc3h12bG3X9I7 835 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Lhx5P61375 402 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Gabrb2P63137 512 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Cyp2c29Q64458 490 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Sv2cQ69ZS6 727 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Fbxw8Q8BIA4 598 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ephb1Q8CBF3 984 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Agbl2Q8CDK2 862 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Snrnp25Q8VIK1 123 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 4933428M09RikQ9D3X3 192 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ccdc8D3YZV8 685 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Kifc5bE9PUA5 672 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Atf6F6VAN0 656 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Cops5O35864 334 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 MafgO54790 162 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Chrm1P12657 460 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ythdf1P59326 559 aaKnown RBP10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 4930430A15RikQ05AC5 485 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 GmpsQ3THK7 693 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Fam172aQ3TNH5 417 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Q3TQQ9 903 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Abhd15Q5F2F2 459 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ddr2Q62371 854 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 N4bp1Q6A037 893 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Bnip1Q6QD59 228 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Gigyf2Q6Y7W8 1291 aaKnown RBP10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Q810S2 196 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Wdr35Q8BND3 1181 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Clec4gQ8BNX1 294 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Slc38a7Q8BWH0 463 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Arhgap29Q8CGF1 1266 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Eif2b5Q8CHW4 717 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Spag16Q8K450 639 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Csde1Q91W50 798 aaKnown RBP10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Decr1Q9CQ62 335 aaKnown RBP10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 1700129C05RikQ9CQ77 218 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 TfgQ9Z1A1 397 aa10.15□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 LgmnO89017 435 aa10.15□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Neurog2P70447 263 aa10.15□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Map3k9Q3U1V8 1077 aa10.15□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Mrgprx2Q3UG50 352 aa10.15□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Q3UJP5 209 aa10.15□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 KizQ3UXL4 695 aa10.15□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Mfhas1Q3V1N1 1048 aa10.15□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Tpp2Q64514 1262 aa10.15□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Klhl17Q6TDP3 640 aa10.15□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Sbno2Q7TNB8 1349 aa10.15□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Atg16l1Q8C0J2 607 aa10.15□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Wrnip1Q91XU0 660 aa10.15□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Mcrs1Q99L90 462 aa10.15□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Tspan17Q9D7W4 270 aa10.15□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Dlc1Q9R0Z9 1092 aa10.15□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Fam71e2L7N480 754 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Nedd9O35177 833 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Cbfa2t2O70374 594 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Olfm1O88998 485 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Psma2P49722 234 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Dlg3P70175 849 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Msx2Q03358 267 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Atxn7l3bQ3UD01 97 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Gcnt3Q5JCT0 437 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Atg9bQ6EBV9 922 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Zfp759Q7M6X3 721 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Cnksr2Q80YA9 1032 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ints6lQ8BND4 861 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Rsl1d1Q8BVY0 452 aaKnown RBP10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 CntrobQ8CB62 887 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Angel2Q8K1C0 544 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Slc35f5Q8R314 524 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Olfr784Q8VFZ9 319 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Noxred1Q9D3S5 366 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ppil2Q9D787 521 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Hmgb2P30681 210 aaKnown RBP10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ccr1P51675 355 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Lzts1P60853 599 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Als2clQ60I26 952 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Itih3Q61704 889 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Stx3Q64704 289 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ino80dQ66JY2 873 aaKnown RBP10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Mrgprb8Q7TN51 330 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 WtipQ7TQJ8 398 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Elac2Q80Y81 831 aaKnown RBP10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Caap1Q8VDY9 356 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Olfr809Q8VEX8 328 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Necab2Q91ZP9 389 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 NonoQ99K48 473 aaKnown RBP10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Polr3hQ9D2C6 204 aaKnown RBP10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Zfyve19Q9DAZ9 389 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Msh5Q9QUM7 833 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Magel2Q9QZ04 1284 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Cd97Q9Z0M6 818 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Gm5538W4VSP6 401 aa10.14□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ranbp9P69566 653 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Mark2Q05512 776 aa10.13□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 51.3 ms