RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Bnip3lQ9Z2F7 218 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Itgb5O70309 798 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Cyp2a4P15392 494 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Cyp2a5P20852 494 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Wnt7bP28047 349 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Slc12a1P55014 1095 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 PhexP70669 749 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Pbxip1Q3TVI8 727 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Ubxn7Q6P5G6 467 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Fam181bQ80VF6 417 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Q8BHN7 327 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Unc45bQ8CGY6 931 aaKnown RBP11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Eva1bQ8K2Y3 164 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 WaslQ91YD9 501 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gtf3c6Q9D8P7 227 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Cables1Q9ESJ1 568 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Ppp2r3cQ9JK24 453 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Tiam2Q6ZPF3 1715 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gcnt4E9Q649 455 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gm3383J3QQ59 259 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gm3164L7N2B9 238 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gm3239L7N2D9 227 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Mxi1P50540 228 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Dsc2P55292 902 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Erbb2P70424 1256 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Srd5a1Q68FF9 255 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Exoc3l4Q6DIA2 721 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Rpf1Q7TND5 349 aaKnown RBP11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Armcx6Q8K3A6 301 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Olfr784Q8VFZ9 319 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Actr3Q99JY9 418 aaKnown RBP11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 GrapQ9CX99 217 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Apobec2Q9WV35 224 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Adamts6D3Z1A5 1117 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 GclmO09172 274 aaKnown RBP11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Impa1O55023 277 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Impdh2P24547 514 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Arl4aP61213 200 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Frg1P97376 258 aaKnown RBP11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Spdye4aQ5IBH6 268 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 FdpsQ920E5 353 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Lyrm1Q9CQB7 122 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Sapcd2Q9D818 391 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Tjp3Q9QXY1 905 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Armt1A6H630 439 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 En1P09065 401 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Pex2P55098 305 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 CiitaP79621 1155 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Rbm20Q3UQS8 1199 aaKnown RBP11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Nell2Q61220 819 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Znf148Q61624 794 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Cd180Q62192 661 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Strip2Q8C9H6 844 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Nrbp2Q91V36 499 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Echdc3Q9D7J9 300 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Dhx35A2ACQ1 703 aaKnown RBP11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 NuggcD3YWJ0 796 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Serpinb3aG3X9V8 387 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Dnase1l3O55070 310 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Bcat1P24288 386 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Cacna1cQ01815 2139 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 PrkcqQ02111 707 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Pim2Q62070 370 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Frmd5Q6P5H6 517 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Chsy1Q6ZQ11 800 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Q8BGA7 448 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Cpsf7Q8BTV2 471 aaKnown RBP11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Zcchc12Q9CZA5 402 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Bscl2Q9Z2E9 383 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Rimbp3Q3V0F0 1606 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Fbxl18E9PYR1 771 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Morc3F7BJB9 942 aaKnown RBP11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 PighQ5M9N4 188 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Tas2r102Q7M717 329 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Tbx10Q810F8 385 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Ano4Q8C5H1 955 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Acvr1cQ8K348 493 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Mcoln2Q8K595 566 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Csde1Q91W50 798 aaKnown RBP11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Arih1Q9Z1K5 555 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Zfp990B1AVN5 605 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Fam71e2L7N480 754 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Magea1O89006 320 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Magea5O89009 320 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Col9a2Q07643 688 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Tnfaip8l3Q3TBL6 204 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Dennd2cQ6P9P8 914 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Phka2Q8BWJ3 1235 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Nipal4Q8BZF2 406 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Q9D1Z2 194 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Psmd12Q9D8W5 456 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Neu2Q9JMH3 379 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Magea2Q9R2A2 320 aa11.69□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Sptlc1O35704 473 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gabrb2P63137 512 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Srebf2Q3U1N2 1130 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Mea1Q64327 174 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Znf507Q6ZPY5 941 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Psd4Q8BLR5 1005 aa11.68□□□□□ -0.54
Topbp1-201ENSMUST00000035164 ItchQ8C863 864 aa11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 41.1 ms