RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 IqcmQ149I8 489 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Fam172aQ3TNH5 417 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Pbxip1Q3TVI8 727 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 PighQ5M9N4 188 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Pglyrp2Q8VCS0 530 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Rxfp2Q91ZZ5 737 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Trmt11Q9CWH5 460 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Rab11fip1Q9D620 645 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Serpina1fQ9DCQ7 411 aa11.26□□□□□ -0.61
Msh3-201ENSMUST00000022220 Bpifb9bA2AJD1 591 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 MtrA6H5Y3 1253 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Farp1F8VPU2 1048 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Xbp1O35426 267 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Prdx5P99029 210 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Skap1Q3UUV5 355 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ccdc185Q3V118 621 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Fbxo39Q5NBU5 443 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Tdrd5Q5VCS6 1040 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Znf148Q61624 794 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Atl2Q6PA06 583 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Bpifb9aQ80XI7 591 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Pramel7Q810Y8 479 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 PlvapQ91VC4 438 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Fam192aQ91WE2 254 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Afg3l1Q920A7 789 aaKnown RBP11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Peak1Q69Z38 1735 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Gm4846B2RWH8 538 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ildr2B5TVM2 661 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Tatdn2B7ZNL9 783 aaKnown RBP11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Vmn2r55G3UWZ4 781 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Vmn2r53L7N473 806 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Has3O08650 554 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 TnfP06804 235 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Gnrh1P13562 90 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Slc1a2P43006 572 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Aldh2P47738 519 aaKnown RBP11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Rasgrf2P70392 1189 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ext2P70428 718 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Pi4k2aQ2TBE6 479 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Q5XFZ0 217 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Fscn1Q61553 493 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ripor1Q68FE6 1223 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Sez6lQ6P1D5 963 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Acap2Q6ZQK5 770 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Catsper3Q80W99 395 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Unc45bQ8CGY6 931 aaKnown RBP11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 D630039A03RikQ8K0M7 236 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Plekha4Q8VC98 588 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Tceal1Q921P9 165 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Def8Q99J78 448 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Tas1r1Q99PG6 842 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Tjp1P39447 1745 aaKnown RBP11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 TprnA2AI08 749 aaKnown RBP11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Gm7694J3QNH8 270 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Gm3424L7N298 263 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Gm8246M0QWX9 263 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Cyp2j6O54750 501 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Glud1P26443 558 aaKnown RBP11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 RnaselQ05921 735 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Znf354cQ571J5 560 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Sh3rf1Q69ZI1 892 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Mib1Q80SY4 1006 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Brat1Q8C3R1 822 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Slc12a9Q99MR3 914 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Xpo7Q9EPK7 1087 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Slc12a4Q9JIS8 1085 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Homer2Q9QWW1 354 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ptgdr2Q9Z2J6 382 aa11.25□□□□□ -0.61
Msh3-201ENSMUST00000022220 Akap1O08715 857 aaKnown RBP11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Cxcl9P18340 126 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 PgfP49764 158 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 GckP52792 465 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Kcna2P63141 499 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 InscQ3HNM7 579 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ntrk3Q6VNS1 825 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Svs3bQ8BZH8 265 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Taf2Q8C176 1104 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Olfr30Q8VGD8 315 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Fam187aQ9D3R5 417 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Sept5Q9Z2Q6 369 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Olfr456B2RT27 312 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Atf6F6VAN0 656 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Gm20509G3UZF1 325 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Soat2O88908 525 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Gucy2eP52785 1108 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Col9a2Q07643 688 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Adrbk2Q3UYH7 688 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Atg9bQ6EBV9 922 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Slc15a5Q8CBB2 566 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Eva1bQ8K2Y3 164 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Olfr458Q8VF80 313 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Olfr457Q8VGP5 313 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Pdk3Q922H2 415 aaKnown RBP11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 MmadhcQ99LS1 296 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ndufaf7Q9CWG8 436 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Batf3Q9D275 118 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Tssk3Q9D2E1 268 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Lrrc71Q9D3W5 558 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Dach1Q9QYB2 751 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Dlc1Q9R0Z9 1092 aa11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms