RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Ubn1Q4G0F8 1135 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 GnasQ6R0H7 1133 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Rtfdc1Q99K95 307 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 KlbQ99N32 1043 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 MlklQ9D2Y4 472 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 ParvaQ9EPC1 372 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 SnrpfP62307 86 aaKnown RBP16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Atp9bP98195 1146 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Fbxo41Q6NS60 873 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Gucy2gQ6TL19 1100 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Gabbr2Q80T41 940 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Lrrc24Q8BHA1 521 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Znf276Q8CE64 614 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Nudcd3Q8R1N4 363 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 MrgbpQ9DAT2 204 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Lima1Q9ERG0 753 aaKnown RBP16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 PapolbQ9WVP6 641 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Cyp2a22B2RXZ2 492 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Hmgcs2P54869 508 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 KizQ3UXL4 695 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 LbpQ61805 481 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Spata21Q8BHW6 681 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Irak3Q8K4B2 609 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Tmco4Q91WU4 631 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Slc25a11Q9CR62 314 aaKnown RBP16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Zfyve19Q9DAZ9 389 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Coro1cQ9WUM4 474 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 TfgQ9Z1A1 397 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Krt27Q9Z320 448 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Zfc3h1B2RT41 1992 aaKnown RBP16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Serpini1O35684 410 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Rpl10aP53026 217 aaKnown RBP16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 NyxP83503 476 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Pdcd1Q02242 288 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Cfap52Q5F201 620 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Znf512Q69Z99 562 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Trim60Q8VI40 466 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 NonoQ99K48 473 aaKnown RBP16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Noxred1Q9D3S5 366 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Mrpl4Q9DCU6 294 aaKnown RBP16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Tbx20Q9ES03 445 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Pdpk1Q9Z2A0 559 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Gm29554A0A087WNW4 188 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 ShdO88834 343 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Pgk2P09041 417 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 ItgalP24063 1163 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Kcna2P63141 499 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Pla2g6P97819 807 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Stk40Q7TNL3 435 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Ubap2lQ80X50 1107 aaKnown RBP16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Spata20Q80YT5 790 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Agbl2Q8CDK2 862 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Trim32Q8CH72 655 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Olfr784Q8VFZ9 319 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 Hes6Q9JHE6 224 aa16.78■□□□□ 0.28
Trim28-201ENSMUST00000005705 ZxdbA2CE44 873 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Ebf3O08791 596 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 SpibO35906 267 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Cbfa2t2O70374 594 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Ccnd3P30282 292 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 InscQ3HNM7 579 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Scube3Q66PY1 993 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Znf12Q7TSI0 686 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Snrnp25Q8VIK1 123 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Plagl1Q9JLQ4 704 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Ror1Q9Z139 937 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Ighv11-2A0A075B5R8 117 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Mup10A2BIN1 180 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Mup14A2CEK7 180 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Mup19A9C497 187 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Mup15A9R9W0 180 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Mup17B5X0G2 180 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Smok3aC0HKC8 504 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Smok3bC0HKC9 504 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Lilra5D3Z7A9 295 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Mup8E9PVW0 235 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Mup7E9QA79 235 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Mup6P02762 180 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Mup1P11588 180 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Mup2P11589 180 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Prmt9Q3U3W5 846 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 WtipQ7TQJ8 398 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Zfp62Q8C827 914 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Gtpbp10Q8K013 366 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Wrnip1Q91XU0 660 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Rmi1Q9D4G9 616 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Rdh14Q9ERI6 334 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 Usp21Q9QZL6 566 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 NinQ61043 2035 aa16.77■□□□□ 0.28
Trim28-201ENSMUST00000005705 IqccA2ADZ8 418 aa16.77■□□□□ 0.27
Trim28-201ENSMUST00000005705 Gm1141B9EJU1 475 aa16.77■□□□□ 0.27
Trim28-201ENSMUST00000005705 Ccr1P51675 355 aa16.77■□□□□ 0.27
Trim28-201ENSMUST00000005705 Spag6Q3V0U9 509 aa16.77■□□□□ 0.27
Trim28-201ENSMUST00000005705 Rbl2Q64700 1135 aa16.77■□□□□ 0.27
Trim28-201ENSMUST00000005705 Cand2Q6ZQ73 1235 aa16.77■□□□□ 0.27
Trim28-201ENSMUST00000005705 Ccdc68Q8BVC4 333 aa16.77■□□□□ 0.27
Trim28-201ENSMUST00000005705 Ccdc28bQ8CEG5 200 aa16.77■□□□□ 0.27
Trim28-201ENSMUST00000005705 OgtQ8CGY8 1046 aa16.77■□□□□ 0.27
Trim28-201ENSMUST00000005705 Tfb1mQ8JZM0 345 aaKnown RBP16.77■□□□□ 0.27
Trim28-201ENSMUST00000005705 SmtnQ921U8 923 aa16.77■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms