RNA–Protein interactions for RNA: YPR005C

HAL1, Transcript of Cytoplasmic protein involved in halotolerance, yeastyeast

Gene HAL1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HAL1YPR005C IRA2P19158 3079 aa0.7□□□□□ -2.3
HAL1YPR005C VPS13Q07878 3144 aa0.68□□□□□ -2.3
HAL1YPR005C YGR146C-AQ8TGT9 53 aa0.67□□□□□ -2.3
HAL1YPR005C MON2P48563 1636 aaPredicted RBP0.66□□□□□ -2.3
HAL1YPR005C MDN1Q12019 4910 aaKnown RBP0.65□□□□□ -2.31
HAL1YPR005C SPT6P23615 1451 aaKnown RBP0.64□□□□□ -2.31
HAL1YPR005C YOR093CQ12275 1648 aa0.63□□□□□ -2.31
HAL1YPR005C SSK2P53599 1579 aa0.61□□□□□ -2.31
HAL1YPR005C IRA1P18963 3092 aa0.6□□□□□ -2.31
HAL1YPR005C USO1P25386 1790 aa0.6□□□□□ -2.31
HAL1YPR005C SNQ2P32568 1501 aaKnown RBP0.59□□□□□ -2.31
HAL1YPR005C CUP1-1P0CX80 61 aa0.59□□□□□ -2.31
HAL1YPR005C CUP1-2P0CX81 61 aa0.59□□□□□ -2.31
HAL1YPR005C YOR192C-CQ3E736 78 aa0.59□□□□□ -2.31
HAL1YPR005C COA2Q3E823 68 aa0.56□□□□□ -2.32
HAL1YPR005C YDR524C-BQ3E6R4 66 aa0.54□□□□□ -2.32
HAL1YPR005C MEC1P38111 2368 aa0.53□□□□□ -2.33
HAL1YPR005C CSF1Q12150 2958 aa0.5□□□□□ -2.33
HAL1YPR005C YLL006W-AQ3E814 58 aa0.47□□□□□ -2.33
HAL1YPR005C BUD3P25558 1636 aa0.46□□□□□ -2.34
HAL1YPR005C NUP192P47054 1683 aa0.46□□□□□ -2.34
HAL1YPR005C ULS1Q08562 1619 aa0.42□□□□□ -2.34
HAL1YPR005C DYN1P36022 4092 aa0.42□□□□□ -2.34
HAL1YPR005C YGL258W-AQ3E740 77 aa0.4□□□□□ -2.35
HAL1YPR005C YPR010C-AA5Z2X5 72 aa0.38□□□□□ -2.35
HAL1YPR005C YOR072W-BQ3E832 53 aa0.38□□□□□ -2.35
HAL1YPR005C TRA1P38811 3744 aa0.35□□□□□ -2.35
HAL1YPR005C HIR3P47171 1648 aa0.3□□□□□ -2.36
HAL1YPR005C YBR056W-AI2HB52 66 aa0.29□□□□□ -2.36
HAL1YPR005C STU1P38198 1513 aa0.28□□□□□ -2.37
HAL1YPR005C YDR034W-BQ6Q5X2 51 aa0.26□□□□□ -2.37
HAL1YPR005C PEP1P32319 1579 aa0.25□□□□□ -2.37
HAL1YPR005C RKR1Q04781 1562 aa0.24□□□□□ -2.37
HAL1YPR005C THO2P53552 1597 aaKnown RBP0.19□□□□□ -2.38
HAL1YPR005C GCN2P15442 1659 aa0.17□□□□□ -2.38
HAL1YPR005C NUP170P38181 1502 aa0.13□□□□□ -2.39
HAL1YPR005C FIG2P25653 1609 aa0.13□□□□□ -2.39
HAL1YPR005C ATG2P53855 1592 aa0.13□□□□□ -2.39
HAL1YPR005C YHR050W-AQ05451 56 aa0.08□□□□□ -2.4
HAL1YPR005C CHC1P22137 1653 aaKnown RBP0.04□□□□□ -2.4
HAL1YPR005C YOR316C-AQ3E806 69 aa0□□□□□ -2.41
HAL1YPR005C FLO1P32768 1537 aa-0.07□□□□□ -2.42
HAL1YPR005C YIL046W-AQ3E7Z4 54 aa-0.15□□□□□ -2.43
HAL1YPR005C COX9P07255 59 aa-0.21□□□□□ -2.44
HAL1YPR005C YDR034C-AP0C289 58 aa-0.22□□□□□ -2.44
HAL1YPR005C YJL133C-AQ3E7A3 74 aa-0.22□□□□□ -2.44
HAL1YPR005C DDR2P89113 61 aa-0.24□□□□□ -2.45
HAL1YPR005C YLR342W-AQ3E810 57 aa-0.28□□□□□ -2.45
HAL1YPR005C MLP2P40457 1679 aa-0.29□□□□□ -2.46
HAL1YPR005C Q0297Q9ZZV8 51 aa-0.29□□□□□ -2.46
HAL1YPR005C RPL29P05747 59 aaPredicted RBP-0.32□□□□□ -2.46
HAL1YPR005C Q0017Q9ZZX8 53 aa-0.42□□□□□ -2.48
HAL1YPR005C YML054C-AQ3E809 52 aa-0.51□□□□□ -2.49
HAL1YPR005C YHR073W-AP0C5N7 58 aa-0.55□□□□□ -2.5
HAL1YPR005C YLL066W-BQ8TGJ7 56 aa-0.64□□□□□ -2.51
HAL1YPR005C YMR105W-AQ8TGS8 64 aa-0.64□□□□□ -2.51
HAL1YPR005C HOR7Q05827 59 aa-0.67□□□□□ -2.52
HAL1YPR005C SMX2P40204 77 aaKnown RBP-0.68□□□□□ -2.52
HAL1YPR005C YJL127C-BQ3E828 52 aa-0.68□□□□□ -2.52
HAL1YPR005C RPL39P04650 51 aa-0.71□□□□□ -2.52
HAL1YPR005C TOM7P53507 60 aa-0.71□□□□□ -2.52
HAL1YPR005C NCE101Q02820 53 aa-0.82□□□□□ -2.54
HAL1YPR005C PMP3P87284 55 aa-1.01□□□□□ -2.57
Retrieved 63 of 5,963 RNA–protein pairs in 5.2 ms