RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C HUB1Q6Q546 73 aa-2.45□□□□□ -2.8
VPS20YMR077C PDR5P33302 1511 aaKnown RBP-2.46□□□□□ -2.8
VPS20YMR077C ESC1Q03661 1658 aaKnown RBP-2.47□□□□□ -2.81
VPS20YMR077C PDR12Q02785 1511 aa-2.47□□□□□ -2.81
VPS20YMR077C SSS1P35179 80 aa-2.48□□□□□ -2.81
VPS20YMR077C ZEO1Q08245 113 aa-2.48□□□□□ -2.81
VPS20YMR077C YGL194C-AQ2V2P6 80 aa-2.48□□□□□ -2.81
VPS20YMR077C DNF1P32660 1571 aa-2.49□□□□□ -2.81
VPS20YMR077C YOR316C-AQ3E806 69 aa-2.49□□□□□ -2.81
VPS20YMR077C STU1P38198 1513 aa-2.5□□□□□ -2.81
VPS20YMR077C SPI1P40092 148 aa-2.5□□□□□ -2.81
VPS20YMR077C YCF1P39109 1515 aaKnown RBP-2.51□□□□□ -2.81
VPS20YMR077C YJL133C-AQ3E7A3 74 aa-2.51□□□□□ -2.81
VPS20YMR077C YCR075W-AQ3E830 75 aa-2.51□□□□□ -2.81
VPS20YMR077C IQG1Q12280 1495 aa-2.52□□□□□ -2.81
VPS20YMR077C Q0297Q9ZZV8 51 aa-2.52□□□□□ -2.81
VPS20YMR077C HIR3P47171 1648 aa-2.53□□□□□ -2.81
VPS20YMR077C LTE1P07866 1435 aa-2.53□□□□□ -2.81
VPS20YMR077C ARO1P08566 1588 aaKnown RBP-2.53□□□□□ -2.82
VPS20YMR077C CHC1P22137 1653 aaKnown RBP-2.53□□□□□ -2.82
VPS20YMR077C YDR034W-BQ6Q5X2 51 aa-2.54□□□□□ -2.82
VPS20YMR077C SPT6P23615 1451 aaKnown RBP-2.57□□□□□ -2.82
VPS20YMR077C TOM7P53507 60 aa-2.57□□□□□ -2.82
VPS20YMR077C CWP2P43497 92 aa-2.58□□□□□ -2.82
VPS20YMR077C SKI3P17883 1432 aaKnown RBP-2.59□□□□□ -2.82
VPS20YMR077C DOP1Q03921 1698 aa-2.6□□□□□ -2.82
VPS20YMR077C IML1P47170 1584 aa-2.6□□□□□ -2.83
VPS20YMR077C YLR157W-DP0CE99 70 aa-2.6□□□□□ -2.83
VPS20YMR077C PDR15Q04182 1529 aaKnown RBP-2.6□□□□□ -2.83
VPS20YMR077C NUP188P52593 1655 aaKnown RBP-2.6□□□□□ -2.83
VPS20YMR077C UFD4P33202 1483 aa-2.62□□□□□ -2.83
VPS20YMR077C VMR1P38735 1592 aa-2.62□□□□□ -2.83
VPS20YMR077C MON2P48563 1636 aaPredicted RBP-2.65□□□□□ -2.83
VPS20YMR077C DDR2P89113 61 aa-2.66□□□□□ -2.84
VPS20YMR077C YIL046W-AQ3E7Z4 54 aa-2.66□□□□□ -2.84
VPS20YMR077C ERI1P62651 68 aaKnown RBP-2.67□□□□□ -2.84
VPS20YMR077C MYO4P32492 1471 aa-2.69□□□□□ -2.84
VPS20YMR077C BUD3P25558 1636 aa-2.69□□□□□ -2.84
VPS20YMR077C PMP3P87284 55 aa-2.71□□□□□ -2.84
VPS20YMR077C MLP2P40457 1679 aa-2.74□□□□□ -2.85
VPS20YMR077C YPR010C-AA5Z2X5 72 aa-2.76□□□□□ -2.85
VPS20YMR077C HOR7Q05827 59 aa-2.76□□□□□ -2.85
VPS20YMR077C YJL127C-BQ3E828 52 aa-2.78□□□□□ -2.85
VPS20YMR077C YOL131WQ08270 108 aa-2.79□□□□□ -2.86
VPS20YMR077C YKL023C-AQ2V2P3 75 aa-2.79□□□□□ -2.86
VPS20YMR077C SCC2Q04002 1493 aa-2.8□□□□□ -2.86
VPS20YMR077C ATG2P53855 1592 aa-2.82□□□□□ -2.86
VPS20YMR077C YOL166W-AQ8TGJ1 51 aa-2.82□□□□□ -2.86
VPS20YMR077C PEP1P32319 1579 aa-2.83□□□□□ -2.86
VPS20YMR077C USO1P25386 1790 aa-2.87□□□□□ -2.87
VPS20YMR077C NUP170P38181 1502 aa-2.87□□□□□ -2.87
VPS20YMR077C COX9P07255 59 aa-2.87□□□□□ -2.87
VPS20YMR077C YSY6P38374 65 aa-2.88□□□□□ -2.87
VPS20YMR077C YLR342W-AQ3E810 57 aa-2.91□□□□□ -2.88
VPS20YMR077C YFL041W-AQ3E817 63 aa-2.91□□□□□ -2.88
VPS20YMR077C RPL39P04650 51 aa-2.93□□□□□ -2.88
VPS20YMR077C YFR010W-AP0C5N0 62 aa-3□□□□□ -2.89
VPS20YMR077C YHR213W-AQ8TGT4 77 aa-3□□□□□ -2.89
VPS20YMR077C SMX2P40204 77 aaKnown RBP-3.04□□□□□ -2.9
VPS20YMR077C YIL102C-AQ2V2P5 75 aa-3.06□□□□□ -2.9
VPS20YMR077C NCE101Q02820 53 aa-3.1□□□□□ -2.91
VPS20YMR077C PAI3P01094 68 aa-3.16□□□□□ -2.92
VPS20YMR077C VMA9Q3E7B6 73 aa-3.48□□□□□ -2.97
Retrieved 63 of 5,963 RNA–protein pairs in 10.3 ms