RNA–Protein interactions for RNA: YMR004W

MVP1, Transcript of Protein required for sorting proteins to the vacuole, yeastyeast

Gene MVP1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MVP1YMR004W TOR1P35169 2470 aa0.19□□□□□ -2.38
MVP1YMR004W YBT1P32386 1661 aa0.18□□□□□ -2.38
MVP1YMR004W NUP188P52593 1655 aaKnown RBP0.18□□□□□ -2.38
MVP1YMR004W YOR093CQ12275 1648 aa0.18□□□□□ -2.38
MVP1YMR004W BUD3P25558 1636 aa0.17□□□□□ -2.38
MVP1YMR004W YPR010C-AA5Z2X5 72 aa0.17□□□□□ -2.38
MVP1YMR004W NUP192P47054 1683 aa0.16□□□□□ -2.38
MVP1YMR004W YHR050W-AQ05451 56 aa0.16□□□□□ -2.38
MVP1YMR004W RKR1Q04781 1562 aa0.16□□□□□ -2.38
MVP1YMR004W COX9P07255 59 aa0.15□□□□□ -2.39
MVP1YMR004W YOR192C-CQ3E736 78 aa0.15□□□□□ -2.39
MVP1YMR004W USO1P25386 1790 aa0.15□□□□□ -2.39
MVP1YMR004W NUP170P38181 1502 aa0.15□□□□□ -2.39
MVP1YMR004W STU1P38198 1513 aa0.15□□□□□ -2.39
MVP1YMR004W ULS1Q08562 1619 aa0.14□□□□□ -2.39
MVP1YMR004W YOR316C-AQ3E806 69 aa0.13□□□□□ -2.39
MVP1YMR004W PEP1P32319 1579 aa0.13□□□□□ -2.39
MVP1YMR004W HIR3P47171 1648 aa0.12□□□□□ -2.39
MVP1YMR004W ATG2P53855 1592 aa0.11□□□□□ -2.39
MVP1YMR004W FIG2P25653 1609 aa0.1□□□□□ -2.39
MVP1YMR004W THO2P53552 1597 aaKnown RBP0.09□□□□□ -2.39
MVP1YMR004W YDR034C-AP0C289 58 aa0.08□□□□□ -2.4
MVP1YMR004W DDR2P89113 61 aa0.08□□□□□ -2.4
MVP1YMR004W FLO1P32768 1537 aa0.07□□□□□ -2.4
MVP1YMR004W GCN2P15442 1659 aa0.06□□□□□ -2.4
MVP1YMR004W Q0017Q9ZZX8 53 aa0.06□□□□□ -2.4
MVP1YMR004W YML054C-AQ3E809 52 aa0.05□□□□□ -2.4
MVP1YMR004W RPL29P05747 59 aaPredicted RBP0.04□□□□□ -2.4
MVP1YMR004W YJL133C-AQ3E7A3 74 aa0.04□□□□□ -2.4
MVP1YMR004W YLR342W-AQ3E810 57 aa0.04□□□□□ -2.4
MVP1YMR004W FMP27Q06179 2628 aa0.01□□□□□ -2.41
MVP1YMR004W TOR2P32600 2474 aaKnown RBP0.01□□□□□ -2.41
MVP1YMR004W YPR117WQ06116 2489 aa0□□□□□ -2.41
MVP1YMR004W SMX2P40204 77 aaKnown RBP0□□□□□ -2.41
MVP1YMR004W YHR073W-AP0C5N7 58 aa-0.01□□□□□ -2.41
MVP1YMR004W MEC1P38111 2368 aa-0.01□□□□□ -2.41
MVP1YMR004W YBR056W-AI2HB52 66 aa-0.02□□□□□ -2.41
MVP1YMR004W YJL127C-BQ3E828 52 aa-0.05□□□□□ -2.42
MVP1YMR004W PMP3P87284 55 aa-0.07□□□□□ -2.42
MVP1YMR004W YMR105W-AQ8TGS8 64 aa-0.07□□□□□ -2.42
MVP1YMR004W TEL1P38110 2787 aa-0.08□□□□□ -2.42
MVP1YMR004W MLP2P40457 1679 aa-0.1□□□□□ -2.42
MVP1YMR004W CHC1P22137 1653 aaKnown RBP-0.11□□□□□ -2.43
MVP1YMR004W HOR7Q05827 59 aa-0.13□□□□□ -2.43
MVP1YMR004W CUP1-1P0CX80 61 aa-0.15□□□□□ -2.43
MVP1YMR004W CUP1-2P0CX81 61 aa-0.15□□□□□ -2.43
MVP1YMR004W DYN1P36022 4092 aa-0.15□□□□□ -2.43
MVP1YMR004W GCN1P33892 2672 aaKnown RBP-0.16□□□□□ -2.44
MVP1YMR004W CSF1Q12150 2958 aa-0.2□□□□□ -2.44
MVP1YMR004W TOM7P53507 60 aa-0.2□□□□□ -2.44
MVP1YMR004W IRA1P18963 3092 aa-0.25□□□□□ -2.45
MVP1YMR004W NUM1Q00402 2748 aa-0.27□□□□□ -2.45
MVP1YMR004W YLL066W-BQ8TGJ7 56 aa-0.3□□□□□ -2.46
MVP1YMR004W TRA1P38811 3744 aa-0.31□□□□□ -2.46
MVP1YMR004W MDN1Q12019 4910 aaKnown RBP-0.31□□□□□ -2.46
MVP1YMR004W NCE101Q02820 53 aa-0.31□□□□□ -2.46
MVP1YMR004W IRA2P19158 3079 aa-0.38□□□□□ -2.47
MVP1YMR004W VPS13Q07878 3144 aa-0.39□□□□□ -2.47
MVP1YMR004W RPL39P04650 51 aa-0.56□□□□□ -2.5
MVP1YMR004W TOM1Q03280 3268 aa-0.68□□□□□ -2.52
MVP1YMR004W YIL046W-AQ3E7Z4 54 aa-0.77□□□□□ -2.53
MVP1YMR004W Q0297Q9ZZV8 51 aa-0.78□□□□□ -2.53
MVP1YMR004W YDR034W-BQ6Q5X2 51 aa-1.38□□□□□ -2.63
Retrieved 63 of 5,963 RNA–protein pairs in 15.1 ms