RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W YOR072W-BQ3E832 53 aa0.02□□□□□ -2.41
SNC1YAL030W YKL023C-AQ2V2P3 75 aa0□□□□□ -2.41
SNC1YAL030W YOR192C-CQ3E736 78 aa0□□□□□ -2.41
SNC1YAL030W BUD3P25558 1636 aa-0.02□□□□□ -2.41
SNC1YAL030W NUP192P47054 1683 aa-0.03□□□□□ -2.41
SNC1YAL030W GCN2P15442 1659 aa-0.05□□□□□ -2.42
SNC1YAL030W SSK2P53599 1579 aa-0.05□□□□□ -2.42
SNC1YAL030W FIG2P25653 1609 aa-0.06□□□□□ -2.42
SNC1YAL030W YHR050W-AQ05451 56 aa-0.07□□□□□ -2.42
SNC1YAL030W SPT6P23615 1451 aaKnown RBP-0.08□□□□□ -2.42
SNC1YAL030W HIR3P47171 1648 aa-0.08□□□□□ -2.42
SNC1YAL030W MON2P48563 1636 aaPredicted RBP-0.08□□□□□ -2.42
SNC1YAL030W YPR010C-AA5Z2X5 72 aa-0.08□□□□□ -2.42
SNC1YAL030W ULS1Q08562 1619 aa-0.09□□□□□ -2.42
SNC1YAL030W FMP27Q06179 2628 aa-0.1□□□□□ -2.42
SNC1YAL030W TOR2P32600 2474 aaKnown RBP-0.11□□□□□ -2.43
SNC1YAL030W STU1P38198 1513 aa-0.13□□□□□ -2.43
SNC1YAL030W YPR117WQ06116 2489 aa-0.14□□□□□ -2.43
SNC1YAL030W RKR1Q04781 1562 aa-0.15□□□□□ -2.43
SNC1YAL030W THO2P53552 1597 aaKnown RBP-0.17□□□□□ -2.44
SNC1YAL030W ATG2P53855 1592 aa-0.18□□□□□ -2.44
SNC1YAL030W YOR316C-AQ3E806 69 aa-0.19□□□□□ -2.44
SNC1YAL030W MEC1P38111 2368 aa-0.19□□□□□ -2.44
SNC1YAL030W FLO1P32768 1537 aa-0.22□□□□□ -2.44
SNC1YAL030W NUP170P38181 1502 aa-0.23□□□□□ -2.45
SNC1YAL030W PEP1P32319 1579 aa-0.23□□□□□ -2.45
SNC1YAL030W YDR034C-AP0C289 58 aa-0.25□□□□□ -2.45
SNC1YAL030W TEL1P38110 2787 aa-0.26□□□□□ -2.45
SNC1YAL030W RPL29P05747 59 aaPredicted RBP-0.29□□□□□ -2.46
SNC1YAL030W COX9P07255 59 aa-0.29□□□□□ -2.46
SNC1YAL030W Q0017Q9ZZX8 53 aa-0.29□□□□□ -2.46
SNC1YAL030W DDR2P89113 61 aa-0.32□□□□□ -2.46
SNC1YAL030W YJL133C-AQ3E7A3 74 aa-0.32□□□□□ -2.46
SNC1YAL030W YML054C-AQ3E809 52 aa-0.33□□□□□ -2.46
SNC1YAL030W GCN1P33892 2672 aaKnown RBP-0.35□□□□□ -2.47
SNC1YAL030W YLR342W-AQ3E810 57 aa-0.35□□□□□ -2.47
SNC1YAL030W DYN1P36022 4092 aa-0.42□□□□□ -2.48
SNC1YAL030W YBR056W-AI2HB52 66 aa-0.45□□□□□ -2.48
SNC1YAL030W YHR073W-AP0C5N7 58 aa-0.45□□□□□ -2.48
SNC1YAL030W CSF1Q12150 2958 aa-0.45□□□□□ -2.48
SNC1YAL030W CHC1P22137 1653 aaKnown RBP-0.46□□□□□ -2.48
SNC1YAL030W YJL127C-BQ3E828 52 aa-0.49□□□□□ -2.49
SNC1YAL030W SMX2P40204 77 aaKnown RBP-0.5□□□□□ -2.49
SNC1YAL030W MLP2P40457 1679 aa-0.5□□□□□ -2.49
SNC1YAL030W IRA1P18963 3092 aa-0.56□□□□□ -2.5
SNC1YAL030W MDN1Q12019 4910 aaKnown RBP-0.57□□□□□ -2.5
SNC1YAL030W CUP1-1P0CX80 61 aa-0.58□□□□□ -2.5
SNC1YAL030W CUP1-2P0CX81 61 aa-0.58□□□□□ -2.5
SNC1YAL030W NUM1Q00402 2748 aa-0.6□□□□□ -2.51
SNC1YAL030W YMR105W-AQ8TGS8 64 aa-0.62□□□□□ -2.51
SNC1YAL030W PMP3P87284 55 aa-0.63□□□□□ -2.51
SNC1YAL030W TRA1P38811 3744 aa-0.67□□□□□ -2.52
SNC1YAL030W TOM7P53507 60 aa-0.74□□□□□ -2.53
SNC1YAL030W HOR7Q05827 59 aa-0.75□□□□□ -2.53
SNC1YAL030W IRA2P19158 3079 aa-0.76□□□□□ -2.53
SNC1YAL030W VPS13Q07878 3144 aa-0.81□□□□□ -2.54
SNC1YAL030W YLL066W-BQ8TGJ7 56 aa-0.95□□□□□ -2.56
SNC1YAL030W NCE101Q02820 53 aa-1.06□□□□□ -2.58
SNC1YAL030W RPL39P04650 51 aa-1.42□□□□□ -2.64
SNC1YAL030W TOM1Q03280 3268 aa-1.48□□□□□ -2.65
SNC1YAL030W YIL046W-AQ3E7Z4 54 aa-1.82□□□□□ -2.7
SNC1YAL030W Q0297Q9ZZV8 51 aa-1.84□□□□□ -2.7
SNC1YAL030W YDR034W-BQ6Q5X2 51 aa-2.91□□□□□ -2.88
Retrieved 63 of 5,963 RNA–protein pairs in 10.8 ms