RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 SLC2A13Q96QE2 648 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 PLVAPQ9BX97 442 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 SLITRK6Q9H5Y7 841 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 CNGB3Q9NQW8 809 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 CHST7Q9NS84 486 aa18.4■□□□□ 0.54
PHGDH-232ENST00000641947 ABI2Q9NYB9 513 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-232ENST00000641947 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.4■□□□□ 0.54
PHGDH-232ENST00000641947 CCDC151A5D8V7 595 aa18.39■□□□□ 0.53
PHGDH-232ENST00000641947 TNFRSF10BO14763 440 aa18.39■□□□□ 0.53
PHGDH-232ENST00000641947 PTPN7P35236 360 aa18.39■□□□□ 0.53
PHGDH-232ENST00000641947 GPR15P49685 360 aa18.39■□□□□ 0.53
PHGDH-232ENST00000641947 YWHAZP63104 245 aaKnown RBP18.39■□□□□ 0.53
PHGDH-232ENST00000641947 TAZQ16635 292 aa18.39■□□□□ 0.53
PHGDH-232ENST00000641947 ZFYVE27Q5T4F4 411 aa18.39■□□□□ 0.53
PHGDH-232ENST00000641947 ZNF280DQ6N043 979 aa18.39■□□□□ 0.53
PHGDH-232ENST00000641947 PRSS55Q6UWB4 352 aaPredicted RBP18.39■□□□□ 0.53
PHGDH-232ENST00000641947 C4orf50Q6ZRC1 276 aa18.39■□□□□ 0.53
PHGDH-232ENST00000641947 OTOP2Q7RTS6 562 aa18.39■□□□□ 0.53
PHGDH-232ENST00000641947 BNIPLQ7Z465 357 aa18.39■□□□□ 0.53
PHGDH-232ENST00000641947 C12orf50Q8NA57 414 aaPredicted RBP18.39■□□□□ 0.53
PHGDH-232ENST00000641947 CMASQ8NFW8 434 aaPredicted RBP18.39■□□□□ 0.53
PHGDH-232ENST00000641947 HSPH1Q92598 858 aa18.39■□□□□ 0.53
PHGDH-232ENST00000641947 FAM118BQ9BPY3 351 aa18.39■□□□□ 0.53
PHGDH-232ENST00000641947 IL23AQ9NPF7 189 aa18.39■□□□□ 0.53
PHGDH-232ENST00000641947 GPATCH2LQ9NWQ4 482 aa18.39■□□□□ 0.53
PHGDH-232ENST00000641947 FBXO21O94952 628 aa18.38■□□□□ 0.53
PHGDH-232ENST00000641947 ZBED1O96006 694 aa18.38■□□□□ 0.53
PHGDH-232ENST00000641947 KDELR1P24390 212 aa18.38■□□□□ 0.53
PHGDH-232ENST00000641947 PTGIRP43119 386 aa18.38■□□□□ 0.53
PHGDH-232ENST00000641947 ARSEP51690 589 aa18.38■□□□□ 0.53
PHGDH-232ENST00000641947 GUCY2DQ02846 1103 aa18.38■□□□□ 0.53
PHGDH-232ENST00000641947 BRD3Q15059 726 aa18.38■□□□□ 0.53
PHGDH-232ENST00000641947 KAZNQ674X7 775 aa18.38■□□□□ 0.53
PHGDH-232ENST00000641947 DCP1BQ8IZD4 617 aaKnown RBP18.38■□□□□ 0.53
PHGDH-232ENST00000641947 CASKIN2Q8WXE0 1202 aa18.38■□□□□ 0.53
PHGDH-232ENST00000641947 NT5C3BQ969T7 300 aa18.38■□□□□ 0.53
PHGDH-232ENST00000641947 MAGOHBQ96A72 148 aaKnown RBP18.38■□□□□ 0.53
PHGDH-232ENST00000641947 IGSF21Q96ID5 467 aa18.38■□□□□ 0.53
PHGDH-232ENST00000641947 TRIM51Q9BSJ1 452 aa18.38■□□□□ 0.53
PHGDH-232ENST00000641947 MAGEB5Q9BZ81 275 aa18.38■□□□□ 0.53
PHGDH-232ENST00000641947 CRISPLD1Q9H336 500 aa18.38■□□□□ 0.53
PHGDH-232ENST00000641947 GDF3Q9NR23 364 aa18.38■□□□□ 0.53
PHGDH-232ENST00000641947 NAALADL1Q9UQQ1 740 aa18.38■□□□□ 0.53
PHGDH-232ENST00000641947 MRPL42Q9Y6G3 142 aaKnown RBP18.38■□□□□ 0.53
PHGDH-232ENST00000641947 USP3Q9Y6I4 520 aa18.38■□□□□ 0.53
PHGDH-232ENST00000641947 PLXNA4Q9HCM2 1894 aa18.38■□□□□ 0.53
PHGDH-232ENST00000641947 CAPN2P17655 700 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 KCNJ1P48048 391 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 ALDH7A1P49419 539 aaKnown RBP18.37■□□□□ 0.53
PHGDH-232ENST00000641947 EPHB4P54760 987 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 ELAVL2Q12926 359 aaKnown RBP18.37■□□□□ 0.53
PHGDH-232ENST00000641947 CA9Q16790 459 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 DCAF6Q58WW2 860 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 ZC3H12AQ5D1E8 599 aaKnown RBP18.37■□□□□ 0.53
PHGDH-232ENST00000641947 TFDP3Q5H9I0 405 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 SDHAF4Q5VUM1 108 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 PM20D1Q6GTS8 502 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 CCDC70Q6NSX1 233 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 SCYL2Q6P3W7 929 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 NPY6RQ99463 290 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 TTPALQ9BTX7 342 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 SNRNP25Q9BV90 132 aaKnown RBP18.37■□□□□ 0.53
PHGDH-232ENST00000641947 PNPLA8Q9NP80 782 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.37■□□□□ 0.53
PHGDH-232ENST00000641947 MTUS1Q9ULD2 1270 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 OR6C75A6NL08 312 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 ADAM12O43184 909 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 PRPSAP2O60256 369 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 ENDOD1O94919 500 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 CHRNA3P32297 505 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 COILP38432 576 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-232ENST00000641947 GRIK1P39086 918 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 PGFP49763 221 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 SULT1E1P49888 294 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 SLC5A3P53794 718 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 COPS2P61201 443 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 PPP2R5EQ16537 467 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 SLC25A52Q3SY17 297 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 CCDC137Q6PK04 289 aaKnown RBP18.37■□□□□ 0.53
PHGDH-232ENST00000641947 KCNT2Q6UVM3 1135 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 CCNI2Q6ZMN8 369 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-232ENST00000641947 CCDC185Q8N715 623 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 ATAD1Q8NBU5 361 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 DCLK3Q9C098 648 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 LRRC19Q9H756 370 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 POPDC2Q9HBU9 364 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 EPB41L5Q9HCM4 733 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.37■□□□□ 0.53
PHGDH-232ENST00000641947 PCYOX1Q9UHG3 505 aa18.37■□□□□ 0.53
PHGDH-232ENST00000641947 CHD7Q9P2D1 2997 aa18.36■□□□□ 0.53
PHGDH-232ENST00000641947 SOAT2O75908 522 aa18.36■□□□□ 0.53
PHGDH-232ENST00000641947 NOS2P35228 1153 aa18.36■□□□□ 0.53
PHGDH-232ENST00000641947 CARSP49589 748 aaKnown RBP18.36■□□□□ 0.53
PHGDH-232ENST00000641947 ARPP19P56211 112 aa18.36■□□□□ 0.53
PHGDH-232ENST00000641947 DR1Q01658 176 aa18.36■□□□□ 0.53
PHGDH-232ENST00000641947 MMRN1Q13201 1228 aa18.36■□□□□ 0.53
PHGDH-232ENST00000641947 SNX1Q13596 522 aa18.36■□□□□ 0.53
PHGDH-232ENST00000641947 DDR2Q16832 855 aa18.36■□□□□ 0.53
PHGDH-232ENST00000641947 BEND6Q5SZJ8 279 aaPredicted RBP18.36■□□□□ 0.53
PHGDH-232ENST00000641947 RNF19BQ6ZMZ0 732 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms