RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 RFPL2O75678 378 aa18.32■□□□□ 0.52
PHGDH-230ENST00000641927 ZMYND10O75800 440 aa18.32■□□□□ 0.52
PHGDH-230ENST00000641927 RFC1P35251 1148 aaPredicted RBP18.32■□□□□ 0.52
PHGDH-230ENST00000641927 YWHAZP63104 245 aaKnown RBP18.32■□□□□ 0.52
PHGDH-230ENST00000641927 TAF10Q12962 218 aa18.32■□□□□ 0.52
PHGDH-230ENST00000641927 TCEAL5Q5H9L2 206 aa18.32■□□□□ 0.52
PHGDH-230ENST00000641927 SLC26A9Q7LBE3 791 aa18.32■□□□□ 0.52
PHGDH-230ENST00000641927 IRGQQ8WZA9 623 aa18.32■□□□□ 0.52
PHGDH-230ENST00000641927 ZNF512Q96ME7 567 aaPredicted RBP18.32■□□□□ 0.52
PHGDH-230ENST00000641927 SLITRK1Q96PX8 696 aa18.32■□□□□ 0.52
PHGDH-230ENST00000641927 CDCA3Q99618 268 aaPredicted RBP18.32■□□□□ 0.52
PHGDH-230ENST00000641927 COMMD8Q9NX08 183 aa18.32■□□□□ 0.52
PHGDH-230ENST00000641927 MYO1FO00160 1098 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 CAPN9O14815 690 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 KIF5CO60282 957 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 LTFP02788 710 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 IGFBP4P22692 258 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 SCNN1AP37088 669 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 YWHAGP61981 247 aaKnown RBP eCLIP18.31■□□□□ 0.52
PHGDH-230ENST00000641927 MESDQ14696 234 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 PPP1R15BQ5SWA1 713 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 HFE2Q6ZVN8 426 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 SCML4Q8N228 414 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 RNF10Q8N5U6 811 aaKnown RBP18.31■□□□□ 0.52
PHGDH-230ENST00000641927 HDAC7Q8WUI4 952 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 PSMG2Q969U7 264 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 IRX2Q9BZI1 471 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-230ENST00000641927 IL37Q9NZH6 218 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 GMIPQ9P107 970 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 ASB3Q9Y575 518 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 A0A1W2PQH9 124 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 TMEM191CA6NGB0 347 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 GLI1P08151 1106 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 HMGA1P17096 107 aaKnown RBP18.31■□□□□ 0.52
PHGDH-230ENST00000641927 FLT3P36888 993 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 TCEAL1Q15170 157 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 BSPRYQ5W0U4 402 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 BTBD8Q5XKL5 378 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 RTL10Q7L3V2 364 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 MON1AQ86VX9 555 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 EDEM1Q92611 657 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 KHSRPQ92945 711 aaKnown RBP eCLIP18.31■□□□□ 0.52
PHGDH-230ENST00000641927 TTLL2Q9BWV7 592 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 POPDC2Q9HBU9 364 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 TMEM59LQ9UK28 342 aa18.31■□□□□ 0.52
PHGDH-230ENST00000641927 MYO16Q9Y6X6 1858 aa18.3■□□□□ 0.52
PHGDH-230ENST00000641927 MTA2O94776 668 aa18.3■□□□□ 0.52
PHGDH-230ENST00000641927 NCAM1P13591 858 aa18.3■□□□□ 0.52
PHGDH-230ENST00000641927 PDGFRAP16234 1089 aa18.3■□□□□ 0.52
PHGDH-230ENST00000641927 PSMA2P25787 234 aa18.3■□□□□ 0.52
PHGDH-230ENST00000641927 DCAF6Q58WW2 860 aa18.3■□□□□ 0.52
PHGDH-230ENST00000641927 BHLHA9Q7RTU4 235 aa18.3■□□□□ 0.52
PHGDH-230ENST00000641927 DAAM2Q86T65 1068 aa18.3■□□□□ 0.52
PHGDH-230ENST00000641927 DEFB106AQ8N104 65 aa18.3■□□□□ 0.52
PHGDH-230ENST00000641927 ARHGAP18Q8N392 663 aa18.3■□□□□ 0.52
PHGDH-230ENST00000641927 TPCN2Q8NHX9 752 aa18.3■□□□□ 0.52
PHGDH-230ENST00000641927 RXFP2Q8WXD0 754 aa18.3■□□□□ 0.52
PHGDH-230ENST00000641927 ALS2CR12Q96Q35 445 aa18.3■□□□□ 0.52
PHGDH-230ENST00000641927 NMUR1Q9HB89 426 aa18.3■□□□□ 0.52
PHGDH-230ENST00000641927 TLR8Q9NR97 1041 aaKnown RBP18.3■□□□□ 0.52
PHGDH-230ENST00000641927 ASNSD1Q9NWL6 643 aa18.3■□□□□ 0.52
PHGDH-230ENST00000641927 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.3■□□□□ 0.52
PHGDH-230ENST00000641927 LMCD1Q9NZU5 365 aa18.3■□□□□ 0.52
PHGDH-230ENST00000641927 CAPN6Q9Y6Q1 641 aa18.3■□□□□ 0.52
PHGDH-230ENST00000641927 MTCL1Q9Y4B5 1905 aaKnown RBP18.3■□□□□ 0.52
PHGDH-230ENST00000641927 FAM92AA1XBS5 289 aa18.29■□□□□ 0.52
PHGDH-230ENST00000641927 BUB1BO60566 1050 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-230ENST00000641927 XYLBO75191 536 aa18.29■□□□□ 0.52
PHGDH-230ENST00000641927 DAB1O75553 588 aa18.29■□□□□ 0.52
PHGDH-230ENST00000641927 GPD1P21695 349 aa18.29■□□□□ 0.52
PHGDH-230ENST00000641927 PGFP49763 221 aa18.29■□□□□ 0.52
PHGDH-230ENST00000641927 HADHBP55084 474 aaKnown RBP18.29■□□□□ 0.52
PHGDH-230ENST00000641927 HYAL1Q12794 435 aa18.29■□□□□ 0.52
PHGDH-230ENST00000641927 VN1R2Q8NFZ6 395 aa18.29■□□□□ 0.52
PHGDH-230ENST00000641927 TRMT2BQ96GJ1 504 aaKnown RBP18.29■□□□□ 0.52
PHGDH-230ENST00000641927 MYRFLQ96LU7 910 aa18.29■□□□□ 0.52
PHGDH-230ENST00000641927 CFAP57Q96MR6 1250 aa18.29■□□□□ 0.52
PHGDH-230ENST00000641927 CORO1BQ9BR76 489 aa18.29■□□□□ 0.52
PHGDH-230ENST00000641927 TRIM62Q9BVG3 475 aa18.29■□□□□ 0.52
PHGDH-230ENST00000641927 GOLPH3Q9H4A6 298 aa18.29■□□□□ 0.52
PHGDH-230ENST00000641927 ZDHHC7Q9NXF8 308 aa18.29■□□□□ 0.52
PHGDH-230ENST00000641927 UXTQ9UBK9 157 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-230ENST00000641927 IP6K2Q9UHH9 426 aa18.29■□□□□ 0.52
PHGDH-230ENST00000641927 NAALADL1Q9UQQ1 740 aa18.29■□□□□ 0.52
PHGDH-230ENST00000641927 GREB1Q4ZG55 1949 aa18.29■□□□□ 0.52
PHGDH-230ENST00000641927 CCDC195A0A1B0GUA6 201 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 C2CD4BA6NLJ0 364 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 ESPNB1AK53 854 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 PALMO75781 387 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 HNRNPA1P09651 372 aaKnown RBP eCLIP18.28■□□□□ 0.52
PHGDH-230ENST00000641927 SRGAP2BP0DMP2 458 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 DESP17661 470 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 SDC4P31431 198 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 MATKP42679 507 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 OGDHQ02218 1023 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 ZNF569Q5MCW4 686 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 TRNP1Q6NT89 227 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 SCD5Q86SK9 330 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 MICALL1Q8N3F8 863 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 C12orf76Q8N812 135 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms