RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 XPO1O14980 1071 aaKnown RBP18.23■□□□□ 0.51
PHGDH-227ENST00000641811 GALR2O43603 387 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-227ENST00000641811 TLR5O60602 858 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 CTHP32929 405 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 USP8P40818 1118 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 IFNAR2P48551 515 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 TUBP50607 506 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 TKTL1P51854 596 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 MYL5Q02045 173 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 KCNMA1Q12791 1236 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 TCF15Q12870 199 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 FZD5Q13467 585 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 PDGFRLQ15198 375 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 KRT31Q15323 416 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 DPY19L2P1Q6NXN4 242 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 ENOSF1Q7L5Y1 443 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 CCDC186Q7Z3E2 898 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 ZNF687Q8N1G0 1237 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 OSCP1Q8WVF1 389 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 WBP2Q969T9 261 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 VPS16Q9H269 839 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 C8orf33Q9H7E9 229 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-227ENST00000641811 NAGPAQ9UK23 515 aa18.23■□□□□ 0.51
PHGDH-227ENST00000641811 MRPS17Q9Y2R5 130 aaKnown RBP18.23■□□□□ 0.51
PHGDH-227ENST00000641811 F5P12259 2224 aa18.22■□□□□ 0.51
PHGDH-227ENST00000641811 M0QYV0 167 aa18.22■□□□□ 0.51
PHGDH-227ENST00000641811 MDM4O15151 490 aa18.22■□□□□ 0.51
PHGDH-227ENST00000641811 GABBR2O75899 941 aa18.22■□□□□ 0.51
PHGDH-227ENST00000641811 RARGP13631 454 aa18.22■□□□□ 0.51
PHGDH-227ENST00000641811 RGS7P49802 495 aa18.22■□□□□ 0.51
PHGDH-227ENST00000641811 MLLT6P55198 1093 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-227ENST00000641811 EML3Q32P44 896 aa18.22■□□□□ 0.51
PHGDH-227ENST00000641811 ANO6Q4KMQ2 910 aa18.22■□□□□ 0.51
PHGDH-227ENST00000641811 SECISBP2LQ93073 1101 aaKnown RBP18.22■□□□□ 0.51
PHGDH-227ENST00000641811 CHFRQ96EP1 664 aa18.22■□□□□ 0.51
PHGDH-227ENST00000641811 NELL2Q99435 816 aa18.22■□□□□ 0.51
PHGDH-227ENST00000641811 OSBPL6Q9BZF3 934 aa18.22■□□□□ 0.51
PHGDH-227ENST00000641811 ULBP1Q9BZM6 244 aa18.22■□□□□ 0.51
PHGDH-227ENST00000641811 NACA2Q9H009 215 aa18.22■□□□□ 0.51
PHGDH-227ENST00000641811 KCNH6Q9H252 994 aa18.22■□□□□ 0.51
PHGDH-227ENST00000641811 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.22■□□□□ 0.51
PHGDH-227ENST00000641811 DNAJC12Q9UKB3 198 aa18.22■□□□□ 0.51
PHGDH-227ENST00000641811 H0Y858 1186 aa18.21■□□□□ 0.51
PHGDH-227ENST00000641811 PIK3R2O00459 728 aa18.21■□□□□ 0.51
PHGDH-227ENST00000641811 LETM1O95202 739 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-227ENST00000641811 ZBED1O96006 694 aa18.21■□□□□ 0.51
PHGDH-227ENST00000641811 PNMA6AP0CW24 399 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-227ENST00000641811 SETSIPP0DME0 302 aa18.21■□□□□ 0.51
PHGDH-227ENST00000641811 IRF1P10914 325 aa18.21■□□□□ 0.51
PHGDH-227ENST00000641811 PLA2G4AP47712 749 aa18.21■□□□□ 0.51
PHGDH-227ENST00000641811 ADIGQ0VDE8 80 aa18.21■□□□□ 0.51
PHGDH-227ENST00000641811 NCAPHQ15003 741 aa18.21■□□□□ 0.51
PHGDH-227ENST00000641811 PON2Q15165 354 aa18.21■□□□□ 0.51
PHGDH-227ENST00000641811 NAIF1Q69YI7 327 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-227ENST00000641811 PMF1Q6P1K2 205 aa18.21■□□□□ 0.51
PHGDH-227ENST00000641811 DENND1BQ6P3S1 775 aa18.21■□□□□ 0.51
PHGDH-227ENST00000641811 RALGPS2Q86X27 583 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-227ENST00000641811 AOPEPQ8N6M6 819 aa18.21■□□□□ 0.51
PHGDH-227ENST00000641811 SLC35F5Q8WV83 523 aa18.21■□□□□ 0.51
PHGDH-227ENST00000641811 SHC3Q92529 594 aa18.21■□□□□ 0.51
PHGDH-227ENST00000641811 CLDN23Q96B33 292 aa18.21■□□□□ 0.51
PHGDH-227ENST00000641811 ECT2Q9H8V3 914 aa18.21■□□□□ 0.51
PHGDH-227ENST00000641811 LRRC4Q9HBW1 653 aa18.21■□□□□ 0.51
PHGDH-227ENST00000641811 CYLDQ9NQC7 956 aa18.21■□□□□ 0.51
PHGDH-227ENST00000641811 LCP1P13796 627 aa18.2■□□□□ 0.5
PHGDH-227ENST00000641811 ATP5C1P36542 298 aaKnown RBP18.2■□□□□ 0.5
PHGDH-227ENST00000641811 NUBP1P53384 320 aa18.2■□□□□ 0.5
PHGDH-227ENST00000641811 STILQ15468 1287 aa18.2■□□□□ 0.5
PHGDH-227ENST00000641811 KLHL40Q2TBA0 621 aa18.2■□□□□ 0.5
PHGDH-227ENST00000641811 C10orf120Q5SQS8 335 aa18.2■□□□□ 0.5
PHGDH-227ENST00000641811 PM20D1Q6GTS8 502 aa18.2■□□□□ 0.5
PHGDH-227ENST00000641811 BHLHA9Q7RTU4 235 aa18.2■□□□□ 0.5
PHGDH-227ENST00000641811 ATP2A3Q93084 1043 aa18.2■□□□□ 0.5
PHGDH-227ENST00000641811 FAM81BQ96LP2 452 aa18.2■□□□□ 0.5
PHGDH-227ENST00000641811 PRRX2Q99811 253 aa18.2■□□□□ 0.5
PHGDH-227ENST00000641811 LSM14BQ9BX40 385 aaKnown RBP18.2■□□□□ 0.5
PHGDH-227ENST00000641811 KLF16Q9BXK1 252 aaPredicted RBP18.2■□□□□ 0.5
PHGDH-227ENST00000641811 HSD3B7Q9H2F3 369 aa18.2■□□□□ 0.5
PHGDH-227ENST00000641811 LMAN1LQ9HAT1 526 aa18.2■□□□□ 0.5
PHGDH-227ENST00000641811 RBM12Q9NTZ6 932 aaKnown RBP18.2■□□□□ 0.5
PHGDH-227ENST00000641811 ARIH1Q9Y4X5 557 aaPredicted RBP18.2■□□□□ 0.5
PHGDH-227ENST00000641811 MIA3Q5JRA6 1907 aa18.19■□□□□ 0.5
PHGDH-227ENST00000641811 FOXN3O00409 490 aaPredicted RBP18.19■□□□□ 0.5
PHGDH-227ENST00000641811 THAP12O43422 761 aa18.19■□□□□ 0.5
PHGDH-227ENST00000641811 GNA15P30679 374 aa18.19■□□□□ 0.5
PHGDH-227ENST00000641811 GJA4P35212 333 aa18.19■□□□□ 0.5
PHGDH-227ENST00000641811 PSEN1P49768 467 aa18.19■□□□□ 0.5
PHGDH-227ENST00000641811 KLK7P49862 253 aa18.19■□□□□ 0.5
PHGDH-227ENST00000641811 YWHAGP61981 247 aaKnown RBP eCLIP18.19■□□□□ 0.5
PHGDH-227ENST00000641811 KLHDC7AQ5VTJ3 777 aa18.19■□□□□ 0.5
PHGDH-227ENST00000641811 DDX42Q86XP3 938 aaKnown RBP eCLIP18.19■□□□□ 0.53e-6■■■□□ 16.1
PHGDH-227ENST00000641811 CPA6Q8N4T0 437 aa18.19■□□□□ 0.5
PHGDH-227ENST00000641811 ZNF606Q8WXB4 792 aa18.19■□□□□ 0.5
PHGDH-227ENST00000641811 KCTD13Q8WZ19 329 aa18.19■□□□□ 0.5
PHGDH-227ENST00000641811 MSANTD3Q96H12 275 aa18.19■□□□□ 0.5
PHGDH-227ENST00000641811 CLIC5Q9NZA1 410 aa18.19■□□□□ 0.5
PHGDH-227ENST00000641811 FHOD1Q9Y613 1164 aa18.19■□□□□ 0.5
PHGDH-227ENST00000641811 E2F8A0AVK6 867 aa18.18■□□□□ 0.5
PHGDH-227ENST00000641811 NCAM2O15394 837 aa18.18■□□□□ 0.5
PHGDH-227ENST00000641811 CHRNB1P11230 501 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms