RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 ADGRF2Q8IZF7 708 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 TMEM86AQ8N2M4 240 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 KIAA1958Q8N8K9 716 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 NECAB1Q8N987 351 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 SNIP1Q8TAD8 396 aaKnown RBP8.37□□□□□ -1.07
PHGDH-217ENST00000641455 FGF11Q92914 225 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 MYLPFQ96A32 169 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 NAF1Q96HR8 494 aaKnown RBP8.37□□□□□ -1.07
PHGDH-217ENST00000641455 LGMNQ99538 433 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 TM6SF1Q9BZW5 370 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 WSB2Q9NYS7 404 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-217ENST00000641455 EHD2Q9NZN4 543 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 LARSQ9P2J5 1176 aaKnown RBP8.37□□□□□ -1.07
PHGDH-217ENST00000641455 HCN2Q9UL51 889 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 AGAP1Q9UPQ3 857 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 NFE2L3Q9Y4A8 694 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 SNX11Q9Y5W9 270 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 CFAP46Q8IYW2 2715 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 METTL12A8MUP2 240 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 B8ZZF3 427 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 NEDD8-MDP1E9PL57 170 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 KCNK3O14649 394 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 JAK2O60674 1132 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 RFPL3O75679 317 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 OLFM2O95897 454 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 OAS1P00973 400 aaKnown RBP8.36□□□□□ -1.07
PHGDH-217ENST00000641455 ITGB3P05106 788 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 KRT19P08727 400 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 BDNFP23560 247 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 ACTN2P35609 894 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 PPP3CCP48454 512 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 LHX1P48742 406 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 AFF3P51826 1226 aaKnown RBP8.36□□□□□ -1.07
PHGDH-217ENST00000641455 TFAMQ00059 246 aaKnown RBP8.36□□□□□ -1.07
PHGDH-217ENST00000641455 RHDQ02161 417 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 TLE3Q04726 772 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 KCNH2Q12809 1159 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 TAF10Q12962 218 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 TARDBPQ13148 414 aaKnown RBP eCLIP8.36□□□□□ -1.07
PHGDH-217ENST00000641455 LY6DQ14210 128 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 BROXQ5VW32 411 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 DBX2Q6ZNG2 339 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 PRICKLE2Q7Z3G6 844 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 ADAT2Q7Z6V5 191 aaKnown RBP8.36□□□□□ -1.07
PHGDH-217ENST00000641455 FAM124AQ86V42 546 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 TMEM25Q86YD3 366 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 BBS7Q8IWZ6 715 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 SPACA3Q8IXA5 215 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 CADM4Q8NFZ8 388 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 OTUB2Q96DC9 234 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 TMEM176AQ96HP8 235 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 ZFRQ96KR1 1074 aaKnown RBP8.36□□□□□ -1.07
PHGDH-217ENST00000641455 SPATA17Q96L03 361 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 SLITRK1Q96PX8 696 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 XPO6Q96QU8 1125 aaKnown RBP8.36□□□□□ -1.07
PHGDH-217ENST00000641455 PLIN2Q99541 437 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 PKMYT1Q99640 499 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 GABRG3Q99928 467 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 SYT15Q9BQS2 421 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 SEMA4CQ9C0C4 833 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 NACA2Q9H009 215 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 ZHX3Q9H4I2 956 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 SPHK2Q9NRA0 654 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 NOL7Q9UMY1 257 aaKnown RBP8.36□□□□□ -1.07
PHGDH-217ENST00000641455 STARD13Q9Y3M8 1113 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 SNX9Q9Y5X1 595 aa8.36□□□□□ -1.07
PHGDH-217ENST00000641455 TISP43B9A030 160 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 WASH3PC4AMC7 463 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 LAD1O00515 517 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 ENC1O14682 589 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 TRIM66O15016 1216 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 BRINP1O60477 761 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 ATP2C2O75185 946 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 FAM13AO94988 1023 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 PIGRP01833 764 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 ACADMP11310 421 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 C6P13671 934 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 PLCG1P19174 1290 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 OXTRP30559 389 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 FUT11Q495W5 492 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 ARHGAP40Q5TG30 622 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 HES3Q5TGS1 186 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 TDRD10Q5VZ19 366 aaKnown RBP8.35□□□□□ -1.07
PHGDH-217ENST00000641455 SLC39A4Q6P5W5 647 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 LAYNQ6UX15 382 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 VSTM1Q6UX27 236 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 USP49Q70CQ1 688 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 MYCT1Q8N699 235 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 NSUN7Q8NE18 718 aaKnown RBP8.35□□□□□ -1.07
PHGDH-217ENST00000641455 SIPA1Q96FS4 1042 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 CDK5RAP3Q96JB5 506 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 BBS2Q9BXC9 721 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 TRIM4Q9C037 500 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 NRSN2Q9GZP1 204 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 CD248Q9HCU0 757 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 USP36Q9P275 1121 aaKnown RBP8.35□□□□□ -1.07
PHGDH-217ENST00000641455 DACH1Q9UI36 760 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 AGO2Q9UKV8 859 aaKnown RBP8.35□□□□□ -1.07
PHGDH-217ENST00000641455 ANKRD6Q9Y2G4 727 aa8.35□□□□□ -1.07
PHGDH-217ENST00000641455 R3HCC1Q9Y3T6 440 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms