RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 PCYT2Q99447 389 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 EPB41L4BQ9H329 900 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 RRN3Q9NYV6 651 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 TCEAL9Q9UHQ7 104 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 TMEM247A6NEH6 219 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 LPXNO60711 386 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 SKIV2L2P42285 1042 aaKnown RBP12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 PEX3P56589 373 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 NR1H3Q13133 447 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 LPIN1Q14693 890 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 CLUL1Q15846 466 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 NRF1Q16656 503 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 PTAR1Q7Z6K3 402 aaPredicted RBP12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 SLC20A1Q8WUM9 679 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 GATA6Q92908 595 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 SLC35C1Q96A29 364 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 FAM136AQ96C01 138 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 RRAGCQ9HB90 399 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 SEL1LQ9UBV2 794 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 SGK1O00141 431 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 DDHD2O94830 711 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 SOX11P35716 441 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 ENTPD1P49961 510 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 CHN2P52757 468 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 YARSP54577 528 aaKnown RBP12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 FOLH1Q04609 750 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 GPS1Q13098 491 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 SFT2D3Q587I9 215 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 RBM15BQ8NDT2 890 aaKnown RBP12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 FBXO27Q8NI29 283 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 TCP10LQ8TDR4 215 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 XPNPEP1Q9NQW7 623 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 TMEM59LQ9UK28 342 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 NUB1Q9Y5A7 615 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 UMODL1Q5DID0 1318 aa12.32□□□□□ -0.44
RBFOX1-224ENST00000641259 ZNFX1Q9P2E3 1918 aaKnown RBP12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 RBAK-RBAKDNI3L0D1 243 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 FARP2O94887 1054 aaPredicted RBP12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 ZSCAN5DPP0CG00 497 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 GSTT2P0CG29 244 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 GSTT2BP0CG30 244 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 CSE1LP55060 971 aaKnown RBP12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 PERM1Q5SV97 790 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 DCAF12L1Q5VU92 463 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 THOC7Q6I9Y2 204 aaKnown RBP12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 CLVS1Q8IUQ0 354 aaPredicted RBP12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 ACSF2Q96CM8 615 aaPredicted RBP12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 SLC10A4Q96EP9 437 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 CEP170P1Q96L14 293 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 CBWD1Q9BRT8 395 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 DMAC2Q9NW81 257 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 SEPT9Q9UHD8 586 aaPredicted RBP12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 MOSPD1Q9UJG1 213 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 DNAJC25-GNG10A0A024R161 153 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 CD58P19256 250 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 PON1P27169 355 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 ICAM3P32942 547 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 NCKAP1LP55160 1127 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 FRMD5Q7Z6J6 570 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 LRRC57Q8N9N7 239 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 PCDH18Q9HCL0 1135 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 FBXO40Q9UH90 709 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 ANAPC7Q9UJX3 599 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 EDF1O60869 148 aaKnown RBP12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 TRMUO75648 421 aaKnown RBP12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 STAM2O75886 525 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 CALCAP01258 141 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 PSAPP07602 524 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 SUPT20HL2P0C7V6 817 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 RPL13P26373 211 aaKnown RBP12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 ARL4CP56559 192 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 DLG4P78352 724 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 ZBTB17Q13105 803 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 SNAPC2Q13487 334 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 UBAP2LQ14157 1087 aaKnown RBP12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 EML3Q32P44 896 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 ZCCHC23Q6ZST2 131 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 SLC13A5Q86YT5 568 aaPredicted RBP12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 ANKLE1Q8NAG6 615 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 GANQ9H2C0 597 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 PDLIM7Q9NR12 457 aa12.31□□□□□ -0.44
RBFOX1-224ENST00000641259 ATG7O95352 703 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 FGFR3P22607 806 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 PLOD1Q02809 727 aaPredicted RBP12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 MAPK6Q16659 721 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 WDR78Q5VTH9 848 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 FBXO16Q8IX29 292 aaPredicted RBP12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 PYROXD1Q8WU10 500 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 BRI3BPQ8WY22 251 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 ANKEF1Q9NU02 776 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 WDR37Q9Y2I8 494 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 MYH9P35579 1960 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 A8MU76 341 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 BTBD19C9JJ37 291 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 GRIN3BO60391 1043 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 MAPK4P31152 587 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 NPTX2P47972 431 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 SLC5A3P53794 718 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 ITGADQ13349 1161 aa12.3□□□□□ -0.44
RBFOX1-224ENST00000641259 GSTA3Q16772 222 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms