RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 PTGIRP43119 386 aa19.07■□□□□ 0.64
PHGDH-209ENST00000641074 DHX34Q14147 1143 aaKnown RBP19.07■□□□□ 0.64
PHGDH-209ENST00000641074 TRADDQ15628 312 aa19.07■□□□□ 0.64
PHGDH-209ENST00000641074 CTXN3Q4LDR2 81 aa19.07■□□□□ 0.64
PHGDH-209ENST00000641074 HFE2Q6ZVN8 426 aa19.07■□□□□ 0.64
PHGDH-209ENST00000641074 TMCO2Q7Z6W1 182 aaPredicted RBP19.07■□□□□ 0.64
PHGDH-209ENST00000641074 DCP1BQ8IZD4 617 aaKnown RBP19.07■□□□□ 0.64
PHGDH-209ENST00000641074 CASKIN2Q8WXE0 1202 aa19.07■□□□□ 0.64
PHGDH-209ENST00000641074 ATG4AQ8WYN0 398 aa19.07■□□□□ 0.64
PHGDH-209ENST00000641074 CWH43Q9H720 699 aa19.07■□□□□ 0.64
PHGDH-209ENST00000641074 CHST7Q9NS84 486 aa19.07■□□□□ 0.64
PHGDH-209ENST00000641074 COL4A6Q14031 1691 aa19.07■□□□□ 0.64
PHGDH-209ENST00000641074 YJEFN3A6XGL0 299 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 BHMG1C9JSJ3 638 aaPredicted RBP19.06■□□□□ 0.64
PHGDH-209ENST00000641074 E7ENQ6 273 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 ZBED1O96006 694 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 CD48P09326 243 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 KCNJ1P48048 391 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 DEFB103AP81534 67 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 ELAVL2Q12926 359 aaKnown RBP19.06■□□□□ 0.64
PHGDH-209ENST00000641074 TAZQ16635 292 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 DCAF6Q58WW2 860 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 TAS1R1Q7RTX1 841 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 TMEM199Q8N511 208 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 KCTD6Q8NC69 237 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 SLC2A13Q96QE2 648 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 TBCBQ99426 244 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 NCAPGQ9BPX3 1015 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 DCLK3Q9C098 648 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 PNPLA8Q9NP80 782 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 TJP3O95049 919 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 AMHP03971 560 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 ACRP10323 421 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 FNTAP49354 379 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 ALDH7A1P49419 539 aaKnown RBP19.06■□□□□ 0.64
PHGDH-209ENST00000641074 CARSP49589 748 aaKnown RBP19.06■□□□□ 0.64
PHGDH-209ENST00000641074 ATXN1P54253 815 aaKnown RBP19.06■□□□□ 0.64
PHGDH-209ENST00000641074 SNX1Q13596 522 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 SLC25A52Q3SY17 297 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 RTP2Q5QGT7 225 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 ZNF280DQ6N043 979 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 BHLHA9Q7RTU4 235 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 IFT81Q8WYA0 676 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 TRIM51Q9BSJ1 452 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 POPDC2Q9HBU9 364 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.06■□□□□ 0.64
PHGDH-209ENST00000641074 ABI2Q9NYB9 513 aaPredicted RBP19.06■□□□□ 0.64
PHGDH-209ENST00000641074 CALCOCO1Q9P1Z2 691 aa19.06■□□□□ 0.64
PHGDH-209ENST00000641074 FAM187AA6NFU0 413 aa19.05■□□□□ 0.64
PHGDH-209ENST00000641074 OR6C75A6NL08 312 aa19.05■□□□□ 0.64
PHGDH-209ENST00000641074 FYNP06241 537 aa19.05■□□□□ 0.64
PHGDH-209ENST00000641074 NOS2P35228 1153 aa19.05■□□□□ 0.64
PHGDH-209ENST00000641074 GRIK1P39086 918 aa19.05■□□□□ 0.64
PHGDH-209ENST00000641074 NFE2Q16621 373 aaPredicted RBP19.05■□□□□ 0.64
PHGDH-209ENST00000641074 BOLA3Q53S33 107 aa19.05■□□□□ 0.64
PHGDH-209ENST00000641074 SYPL2Q5VXT5 272 aa19.05■□□□□ 0.64
PHGDH-209ENST00000641074 FAM117BQ6P1L5 589 aa19.05■□□□□ 0.64
PHGDH-209ENST00000641074 STRADAQ7RTN6 431 aa19.05■□□□□ 0.64
PHGDH-209ENST00000641074 JAMLQ86YT9 394 aa19.05■□□□□ 0.64
PHGDH-209ENST00000641074 CCDC105Q8IYK2 499 aa19.05■□□□□ 0.64
PHGDH-209ENST00000641074 NT5C3BQ969T7 300 aa19.05■□□□□ 0.64
PHGDH-209ENST00000641074 ZNF689Q96CS4 500 aaPredicted RBP19.05■□□□□ 0.64
PHGDH-209ENST00000641074 RUNDC3BQ96NL0 473 aa19.05■□□□□ 0.64
PHGDH-209ENST00000641074 EFR3BQ9Y2G0 817 aa19.05■□□□□ 0.64
PHGDH-209ENST00000641074 EN2P19622 333 aaPredicted RBP19.04■□□□□ 0.64
PHGDH-209ENST00000641074 SULT1E1P49888 294 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 ARSEP51690 589 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 WDR5P61964 334 aaKnown RBP19.04■□□□□ 0.64
PHGDH-209ENST00000641074 PITX1P78337 314 aaPredicted RBP19.04■□□□□ 0.64
PHGDH-209ENST00000641074 CCNG2Q16589 344 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 MAP9Q49MG5 647 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 OTUD1Q5VV17 481 aaPredicted RBP19.04■□□□□ 0.64
PHGDH-209ENST00000641074 PM20D1Q6GTS8 502 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 TEKT4Q8WW24 435 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 NPY6RQ99463 290 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 FAM118BQ9BPY3 351 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 HOMER3Q9NSC5 361 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 NAALADL1Q9UQQ1 740 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 UTP11Q9Y3A2 253 aaKnown RBP19.04■□□□□ 0.64
PHGDH-209ENST00000641074 USP3Q9Y6I4 520 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 TBC1D4O60343 1298 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 ENDOD1O94919 500 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 EFEMP2O95967 443 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 CDH6P55285 790 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 ZC3H12AQ5D1E8 599 aaKnown RBP19.04■□□□□ 0.64
PHGDH-209ENST00000641074 RSPO2Q6UXX9 243 aaPredicted RBP19.04■□□□□ 0.64
PHGDH-209ENST00000641074 UBE2Q1Q7Z7E8 422 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 DDX42Q86XP3 938 aaKnown RBP eCLIP19.04■□□□□ 0.643e-6■■■□□ 16.1
PHGDH-209ENST00000641074 SCAMP5Q8TAC9 235 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 AENQ8WTP8 325 aaKnown RBP19.04■□□□□ 0.64
PHGDH-209ENST00000641074 IRGQQ8WZA9 623 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 SEC14L1Q92503 715 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 FUBP3Q96I24 572 aaKnown RBP eCLIP19.04■□□□□ 0.64
PHGDH-209ENST00000641074 PGLYRP2Q96PD5 576 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 TTPALQ9BTX7 342 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 SNRNP25Q9BV90 132 aaKnown RBP19.04■□□□□ 0.64
PHGDH-209ENST00000641074 CALN1Q9BXU9 219 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 GPATCH2LQ9NWQ4 482 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 NFU1Q9UMS0 254 aa19.04■□□□□ 0.64
PHGDH-209ENST00000641074 TNFRSF10BO14763 440 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms