RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 UGCGQ16739 394 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 RAB6CQ53S08 254 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 XKR9Q5GH70 373 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 LIN9Q5TKA1 542 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 CC2D2BQ6DHV5 1058 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 UGT2A3Q6UWM9 527 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 ANKRD23Q86SG2 305 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 TDRPQ86YL5 185 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 SIAH1Q8IUQ4 282 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 RBM12BQ8IXT5 1001 aaKnown RBP14.28□□□□□ -0.12
SCARB2-227ENST00000640957 CRYGNQ8WXF5 182 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 MARK4Q96L34 752 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 RAB6CQ9H0N0 254 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 STRIP2Q9ULQ0 834 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 RPL26L1Q9UNX3 145 aaKnown RBP14.28□□□□□ -0.12
SCARB2-227ENST00000640957 POMPQ9Y244 141 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 ZHX2Q9Y6X8 837 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 PHLPP1O60346 1717 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 CNTNAP2Q9UHC6 1331 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 SERPINB5P36952 375 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 ETFBP38117 255 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 EN1Q05925 392 aaPredicted RBP14.28□□□□□ -0.12
SCARB2-227ENST00000640957 ANKRD20A4Q4UJ75 823 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 TRMT10BQ6PF06 316 aaKnown RBP14.28□□□□□ -0.12
SCARB2-227ENST00000640957 OXCT2Q9BYC2 517 aaPredicted RBP14.28□□□□□ -0.12
SCARB2-227ENST00000640957 RMI1Q9H9A7 625 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 IGKV6D-41A0A0C4DH26 115 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 TM9SF1O15321 606 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 GTF2H1P32780 548 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 ALDH1A3P47895 512 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 NAA20P61599 178 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 FRMD7Q6ZUT3 714 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 CERKQ8TCT0 537 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 ZNF516Q92618 1163 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 TEKT3Q9BXF9 490 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 RAVER2Q9HCJ3 691 aaKnown RBP14.28□□□□□ -0.12
SCARB2-227ENST00000640957 BTBD7Q9P203 1132 aa14.28□□□□□ -0.12
SCARB2-227ENST00000640957 IQANK1A0A1B0GTG1 560 aa14.27□□□□□ -0.12
SCARB2-227ENST00000640957 RXRBP28702 533 aa14.27□□□□□ -0.12
SCARB2-227ENST00000640957 ABCD1P33897 745 aa14.27□□□□□ -0.12
SCARB2-227ENST00000640957 MRPS5P82675 430 aaKnown RBP14.27□□□□□ -0.12
SCARB2-227ENST00000640957 ZNF252P-AS1Q0IIN9 211 aa14.27□□□□□ -0.12
SCARB2-227ENST00000640957 TBL3Q12788 808 aaKnown RBP14.27□□□□□ -0.12
SCARB2-227ENST00000640957 CEP55Q53EZ4 464 aa14.27□□□□□ -0.12
SCARB2-227ENST00000640957 ATG14Q6ZNE5 492 aa14.27□□□□□ -0.12
SCARB2-227ENST00000640957 SDCCAG8Q86SQ7 713 aaPredicted RBP14.27□□□□□ -0.12
SCARB2-227ENST00000640957 RFX6Q8HWS3 928 aa14.27□□□□□ -0.12
SCARB2-227ENST00000640957 EXD1Q8NHP7 514 aa14.27□□□□□ -0.12
SCARB2-227ENST00000640957 DCUN1D1Q96GG9 259 aa14.27□□□□□ -0.12
SCARB2-227ENST00000640957 PRICKLE1Q96MT3 831 aaPredicted RBP14.27□□□□□ -0.12
SCARB2-227ENST00000640957 CCDC106Q9BWC9 280 aa14.27□□□□□ -0.12
SCARB2-227ENST00000640957 WWP1Q9H0M0 922 aa14.27□□□□□ -0.12
SCARB2-227ENST00000640957 GJA3Q9Y6H8 435 aa14.27□□□□□ -0.12
SCARB2-227ENST00000640957 TTC36A6NLP5 189 aa14.27□□□□□ -0.13
SCARB2-227ENST00000640957 AMHP03971 560 aa14.27□□□□□ -0.13
SCARB2-227ENST00000640957 STIP1P31948 543 aaKnown RBP14.27□□□□□ -0.13
SCARB2-227ENST00000640957 CPOXP36551 454 aa14.27□□□□□ -0.13
SCARB2-227ENST00000640957 CYLC2Q14093 348 aaPredicted RBP14.27□□□□□ -0.13
SCARB2-227ENST00000640957 OASLQ15646 514 aaKnown RBP14.27□□□□□ -0.13
SCARB2-227ENST00000640957 ZBTB41Q5SVQ8 909 aa14.27□□□□□ -0.13
SCARB2-227ENST00000640957 TMCO4Q5TGY1 634 aa14.27□□□□□ -0.13
SCARB2-227ENST00000640957 SPNS2Q8IVW8 549 aa14.27□□□□□ -0.13
SCARB2-227ENST00000640957 IL31RAQ8NI17 732 aa14.27□□□□□ -0.13
SCARB2-227ENST00000640957 GAB3Q8WWW8 586 aa14.27□□□□□ -0.13
SCARB2-227ENST00000640957 MBOAT7Q96N66 472 aa14.27□□□□□ -0.13
SCARB2-227ENST00000640957 RNPEPQ9H4A4 650 aa14.27□□□□□ -0.13
SCARB2-227ENST00000640957 CAAP1Q9H8G2 361 aa14.27□□□□□ -0.13
SCARB2-227ENST00000640957 ZNF358Q9NW07 568 aa14.27□□□□□ -0.13
SCARB2-227ENST00000640957 CDH22Q9UJ99 828 aa14.27□□□□□ -0.13
SCARB2-227ENST00000640957 AP4B1Q9Y6B7 739 aa14.27□□□□□ -0.13
SCARB2-227ENST00000640957 ATP8B3O60423 1300 aa14.27□□□□□ -0.13
SCARB2-227ENST00000640957 F8W8V4 182 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 HOXA7P31268 230 aaPredicted RBP14.26□□□□□ -0.13
SCARB2-227ENST00000640957 FDFT1P37268 417 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 ENTPD1P49961 510 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 CDKL1Q00532 357 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 STX3Q13277 289 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 PPM1LQ5SGD2 360 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 PPP1R2P3Q6NXS1 205 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 MON1BQ7L1V2 547 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 LDHDQ86WU2 507 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 PPIL6Q8IXY8 311 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 KATNAL2Q8IYT4 538 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.26□□□□□ -0.13
SCARB2-227ENST00000640957 FEZF2Q8TBJ5 459 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 ZNF398Q8TD17 642 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 ZBTB45Q96K62 511 aaPredicted RBP14.26□□□□□ -0.13
SCARB2-227ENST00000640957 ZNF341Q9BYN7 854 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 C17orf75Q9HAS0 396 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 RBMX2Q9Y388 322 aaKnown RBP14.26□□□□□ -0.13
SCARB2-227ENST00000640957 TELO2Q9Y4R8 837 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 HEY1Q9Y5J3 304 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 DDX60LQ5H9U9 1706 aaKnown RBP14.26□□□□□ -0.13
SCARB2-227ENST00000640957 NHSL1Q5SYE7 1610 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 HOXA10P31260 410 aaPredicted RBP14.26□□□□□ -0.13
SCARB2-227ENST00000640957 NT5C2P49902 561 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 KLHL38Q2WGJ6 581 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 SLC44A4Q53GD3 710 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 FAM219BQ5XKK7 198 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 ZDHHC15Q96MV8 337 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms