RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 PRCCQ92733 491 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 TAMM41Q96BW9 452 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 OXNAD1Q96HP4 312 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 PLEKHA8Q96JA3 519 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 SCYL1Q96KG9 808 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 FAM213AQ9BRX8 229 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 EMILIN2Q9BXX0 1053 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 ADNPQ9H2P0 1102 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 IPO11Q9UI26 975 aaKnown RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 PRR23D1E9PI22 279 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 INO80B-WBP1J3KQ70 363 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 CCNE2O96020 404 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 SNRPAP09012 282 aaKnown RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 PRR23D2P0DMB1 279 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 SLC9A1P19634 815 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 NMT1P30419 496 aaKnown RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 TUFMP49411 452 aaKnown RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 ERFP50548 548 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 POU5F1Q01860 360 aaKnown RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 TRAF3Q13114 568 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 EZH2Q15910 746 aaKnown RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 IZUMO3Q5VZ72 239 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 BORAQ6PGQ7 559 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 ZBTB33Q86T24 672 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 SNX32Q86XE0 403 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 ZNF564Q8TBZ8 553 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 KRT35Q92764 455 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 YME1L1Q96TA2 773 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 NUP85Q9BW27 656 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 CELF4Q9BZC1 486 aaKnown RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 INO80BQ9C086 356 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 TMEM245Q9H330 911 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 CCNB1IP1Q9NPC3 277 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 AVENQ9NQS1 362 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 HESX1Q9UBX0 185 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 CAPN6Q9Y6Q1 641 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 PTPRUQ92729 1446 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 MAP2P11137 1827 aaKnown RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 ECE2O60344 883 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 CYP4F2P78329 520 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 CYP4F3Q08477 520 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 TRAF2Q12933 501 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 ALFQ53S48 1182 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 TNFAIP8L3Q5GJ75 292 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 DEPDC1Q5TB30 811 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 TTC39BQ5VTQ0 682 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 TRIM72Q6ZMU5 477 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 USP13Q92995 863 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 ERLEC1Q96DZ1 483 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 PLA2G12BQ9BX93 195 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 USE1Q9NZ43 259 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 SUCOQ9UBS9 1254 aaKnown RBP8.54□□□□□ -1.04
NECAP1-227ENST00000640648 CLEC11AQ9Y240 323 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 B3GNT3Q9Y2A9 372 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 STON1Q9Y6Q2 735 aa8.54□□□□□ -1.04
NECAP1-227ENST00000640648 A0A1W2PQ72 361 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 CCDC182A6NF36 153 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 SLC16A4O15374 487 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 ERP29P30040 261 aaKnown RBP8.53□□□□□ -1.04
NECAP1-227ENST00000640648 PHC1P78364 1004 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 TROAPQ12815 778 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 PDK4Q16654 411 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 GATAD2AQ86YP4 633 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 XXYLT1Q8NBI6 393 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 STARD8Q92502 1023 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 INTS2Q9H0H0 1204 aaKnown RBP8.53□□□□□ -1.04
NECAP1-227ENST00000640648 RMND5AQ9H871 391 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 NRXN1Q9ULB1 1477 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 E9PBE3 544 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 SSTR3P32745 418 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-227ENST00000640648 SLC18A1P54219 525 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 RAD23AP54725 363 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 GALCP54803 685 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 ZNF200P98182 395 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-227ENST00000640648 PUDPQ08623 228 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 AP3B2Q13367 1082 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 DARS2Q6PI48 645 aaKnown RBP8.53□□□□□ -1.04
NECAP1-227ENST00000640648 PADI6Q6TGC4 694 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 EFL1Q7Z2Z2 1120 aaKnown RBP8.53□□□□□ -1.04
NECAP1-227ENST00000640648 FRMD5Q7Z6J6 570 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 C12orf56Q8IXR9 622 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 BBS5Q8N3I7 341 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 DCLK2Q8N568 766 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 SCFD2Q8WU76 684 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 PDCD6IPQ8WUM4 868 aaKnown RBP8.53□□□□□ -1.04
NECAP1-227ENST00000640648 DHX38Q92620 1227 aaKnown RBP8.53□□□□□ -1.04
NECAP1-227ENST00000640648 PROX1Q92786 737 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 MYPNQ86TC9 1320 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 SPDYE5A6NIY4 337 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 RIPK2O43353 540 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 RAD17O75943 681 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 CRYZL1O95825 349 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 UCHL3P15374 230 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 ATF6P18850 670 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 M6PRP20645 277 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 ADSSP30520 456 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 FDFT1P37268 417 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 MAGEA4P43358 317 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 PRAMEP78395 509 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 KRT17Q04695 432 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms