RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 TRMT10BQ6PF06 316 aaKnown RBP15.19■□□□□ 0.02
SCARB2-221ENST00000640341 C4orf50Q6ZRC1 276 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 LMNTD2Q8IXW0 634 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 UNC5BQ8IZJ1 945 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 FBXO27Q8NI29 283 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 VPS11Q9H270 941 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 RSAD1Q9HA92 442 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 IL1RAPL1Q9NZN1 696 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 PCDHGC3Q9UN70 934 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 AKT3Q9Y243 479 aa15.19■□□□□ 0.02
SCARB2-221ENST00000640341 STAG3L1P0CL83 205 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 PGM1P36871 562 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 CCNHP51946 323 aaPredicted RBP15.18■□□□□ 0.02
SCARB2-221ENST00000640341 NDST1P52848 882 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 TARBP2Q15633 366 aaKnown RBP15.18■□□□□ 0.02
SCARB2-221ENST00000640341 CA9Q16790 459 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 ACSBG2Q5FVE4 666 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 MAP1SQ66K74 1059 aaPredicted RBP15.18■□□□□ 0.02
SCARB2-221ENST00000640341 RGS9BPQ6ZS82 235 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 FAM183BPQ6ZVS7 135 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 NDUFAF2Q8N183 169 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 NIPA2Q8N8Q9 360 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 FAXDC2Q96IV6 333 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 TAS2R1Q9NYW7 299 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 TSPAN16Q9UKR8 245 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 GSC2O15499 205 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 VTNP04004 478 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 F7P08709 466 aaPredicted RBP15.18■□□□□ 0.02
SCARB2-221ENST00000640341 GPD1P21695 349 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 BST1Q10588 318 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 CTC1Q2NKJ3 1217 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 SNX30Q5VWJ9 437 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 TRNP1Q6NT89 227 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 CFAP61Q8NHU2 1237 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 TRPM4Q8TD43 1214 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 MZB1Q8WU39 189 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 OXNAD1Q96HP4 312 aaPredicted RBP15.18■□□□□ 0.02
SCARB2-221ENST00000640341 CYLDQ9NQC7 956 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 BATF3Q9NR55 127 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 KRT37O76014 449 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 ATG7O95352 703 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 GNAZP19086 355 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 OAZ1P54368 228 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 CDK16Q00536 496 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 MXD4Q14582 209 aaPredicted RBP15.18■□□□□ 0.02
SCARB2-221ENST00000640341 C16orf46Q6P387 395 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 NUDCD3Q8IVD9 361 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 MPP5Q8N3R9 675 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 ZNF276Q8N554 614 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 SLC44A1Q8WWI5 657 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 ATXN7L3BQ96GX2 97 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 HPDLQ96IR7 371 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 TTC1Q99614 292 aa15.18■□□□□ 0.02
SCARB2-221ENST00000640341 A0A087WZ62 844 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 MEI4A8MW99 385 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 NVLO15381 856 aaKnown RBP15.17■□□□□ 0.02
SCARB2-221ENST00000640341 OSBPP22059 807 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 AQP5P55064 265 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 SLC26A11Q86WA9 606 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.17■□□□□ 0.02
SCARB2-221ENST00000640341 HIPK4Q8NE63 616 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 FAM172AQ8WUF8 416 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 UCMAQ8WVF2 138 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 ALKBH8Q96BT7 664 aaKnown RBP15.17■□□□□ 0.02
SCARB2-221ENST00000640341 FDXACB1Q9BRP7 624 aaPredicted RBP15.17■□□□□ 0.02
SCARB2-221ENST00000640341 THTPAQ9BU02 230 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 DHX35Q9H5Z1 703 aaKnown RBP15.17■□□□□ 0.02
SCARB2-221ENST00000640341 NMRK1Q9NWW6 199 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 C19orf81C9J6K1 198 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 GMPRP36959 345 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 YWHAZP63104 245 aaKnown RBP15.17■□□□□ 0.02
SCARB2-221ENST00000640341 LRRC36Q1X8D7 754 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 METTL7BQ6UX53 244 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 ACOT1Q86TX2 421 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 DCLRE1BQ9H816 532 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 KCNK13Q9HB14 408 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 DLGAP2Q9P1A6 1054 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 WASF2Q9Y6W5 498 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 DPPA5A6NC42 116 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 LUC7L3O95232 432 aaKnown RBP15.17■□□□□ 0.02
SCARB2-221ENST00000640341 TFE3P19532 575 aaPredicted RBP15.17■□□□□ 0.02
SCARB2-221ENST00000640341 TUBP50607 506 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 ENPEPQ07075 957 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 TMEM154Q6P9G4 183 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 CMASQ8NFW8 434 aaPredicted RBP15.17■□□□□ 0.02
SCARB2-221ENST00000640341 FBXO41Q8TF61 875 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 PGLYRP2Q96PD5 576 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 MMP19Q99542 508 aa15.17■□□□□ 0.02
SCARB2-221ENST00000640341 NFKBIEO00221 500 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 ACKR2O00590 384 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 SMNDC1O75940 238 aaKnown RBP eCLIP15.16■□□□□ 0.02
SCARB2-221ENST00000640341 DLDP09622 509 aaKnown RBP15.16■□□□□ 0.02
SCARB2-221ENST00000640341 STIP1P31948 543 aaKnown RBP15.16■□□□□ 0.02
SCARB2-221ENST00000640341 GPD2P43304 727 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 SLC18A1P54219 525 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 TMEM62Q0P6H9 643 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 ANO7Q6IWH7 933 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 E2F7Q96AV8 911 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 KLRG1Q96E93 195 aa15.16■□□□□ 0.02
SCARB2-221ENST00000640341 APOL6Q9BWW8 343 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms