RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 SNX30Q5VWJ9 437 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 SCUBE3Q8IX30 993 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 ZDHHC14Q8IZN3 488 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 CMTM8Q8IZV2 173 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 SCML4Q8N228 414 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 PLCD3Q8N3E9 789 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 SLC30A5Q8TAD4 765 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 ADAMTS19Q8TE59 1207 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 RSAD2Q8WXG1 361 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 SYN2Q92777 582 aaPredicted RBP13.87□□□□□ -0.19
GTF3A-209ENST00000640289 FGF14Q92915 247 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 PIWIL1Q96J94 861 aaKnown RBP13.87□□□□□ -0.19
GTF3A-209ENST00000640289 ASB16Q96NS5 453 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 NOX5Q96PH1 765 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 DNAJC7Q99615 494 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 RPP25Q9BUL9 199 aaKnown RBP13.87□□□□□ -0.19
GTF3A-209ENST00000640289 RNF38Q9H0F5 515 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 CD320Q9NPF0 282 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 CNGB3Q9NQW8 809 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 ZFP37Q9Y6Q3 630 aaPredicted RBP13.87□□□□□ -0.19
GTF3A-209ENST00000640289 PATJQ8NI35 1801 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 NCANO14594 1321 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 GOLGA6L3A6NEY3 463 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 AKR1B15C9JRZ8 316 aaPredicted RBP13.86□□□□□ -0.19
GTF3A-209ENST00000640289 COCHO43405 550 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 FBXO21O94952 628 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 TBX18O95935 607 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 ASGR2P07307 311 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 TPM1P09493 284 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 RARGP13631 454 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 FCARP24071 287 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 DDX6P26196 483 aaKnown RBP eCLIP13.86□□□□□ -0.19
GTF3A-209ENST00000640289 AVPR1AP37288 418 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 VIPR2P41587 438 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 YWHAGP61981 247 aaKnown RBP eCLIP13.86□□□□□ -0.19
GTF3A-209ENST00000640289 ARID5BQ14865 1188 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 HECTD3Q5T447 861 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 TANGO2Q6ICL3 276 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 OR6B2Q6IFH4 312 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 WDR59Q6PJI9 974 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 FAM183BPQ6ZVS7 135 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 ARID3BQ8IVW6 561 aaPredicted RBP13.86□□□□□ -0.19
GTF3A-209ENST00000640289 OR8K1Q8NGG5 319 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 IPO4Q8TEX9 1081 aaKnown RBP13.86□□□□□ -0.19
GTF3A-209ENST00000640289 SMARCD2Q92925 531 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 RSPRY1Q96DX4 576 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 KXD1Q9BQD3 176 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 PLA2G2FQ9BZM2 168 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 GRPEL1Q9HAV7 217 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 CYLDQ9NQC7 956 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 ABHD10Q9NUJ1 306 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.86□□□□□ -0.19
GTF3A-209ENST00000640289 ARHGAP20Q9P2F6 1191 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 CCL26Q9Y258 94 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 NUMBLQ9Y6R0 609 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 GREB1Q4ZG55 1949 aa13.86□□□□□ -0.19
GTF3A-209ENST00000640289 TRAV19A0A0A6YYK7 116 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 DDX3XO00571 662 aaKnown RBP eCLIP13.85□□□□□ -0.191e-27■■■■■ 74.8
GTF3A-209ENST00000640289 MDM4O15151 490 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 TLR5O60602 858 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 OLFM2O95897 454 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 SERPING1P05155 500 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 CKMP06732 381 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 HDCP19113 662 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 HNRNPH3P31942 346 aaKnown RBP13.85□□□□□ -0.19
GTF3A-209ENST00000640289 CENPCQ03188 943 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 HTR4Q13639 388 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 TAF5Q15542 800 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 BSPRYQ5W0U4 402 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 BTBD8Q5XKL5 378 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 TRIM72Q6ZMU5 477 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 MMS22LQ6ZRQ5 1243 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 ERICH1Q86X53 443 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 DNAAF5Q86Y56 855 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 DRC7Q8IY82 874 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 GJD3Q8N144 294 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 TC2NQ8N9U0 490 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 EDEM1Q92611 657 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 USP13Q92995 863 aaPredicted RBP13.85□□□□□ -0.19
GTF3A-209ENST00000640289 C11orf70Q9BRQ4 267 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 SYNCQ9H7C4 482 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 KCNK12Q9HB15 430 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 TAS2R14Q9NYV8 317 aa13.85□□□□□ -0.19
GTF3A-209ENST00000640289 SOBPA7XYQ1 873 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 TMCO5BA8MYB1 307 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 ANHXE9PGG2 379 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 LTFP02788 710 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 MBL2P11226 248 aaPredicted RBP13.84□□□□□ -0.19
GTF3A-209ENST00000640289 RALAP11233 206 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 CDC25BP30305 580 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 NSFP46459 744 aaKnown RBP13.84□□□□□ -0.19
GTF3A-209ENST00000640289 GABRB2P47870 512 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 PSEN1P49768 467 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 TUBP50607 506 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 ZXDBP98169 803 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 OLFML1Q6UWY5 402 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 PHLDB2Q86SQ0 1253 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 XYLT1Q86Y38 959 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 CNGA4Q8IV77 575 aa13.84□□□□□ -0.19
GTF3A-209ENST00000640289 ARHGAP18Q8N392 663 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms