RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 SLC46A1Q96NT5 459 aa1.21□□□□□ -2.22
LMBR1-222ENST00000638959 DUX3Q96PT4 197 aa1.21□□□□□ -2.22
LMBR1-222ENST00000638959 UHRF2Q96PU4 802 aa1.21□□□□□ -2.22
LMBR1-222ENST00000638959 TRMT61BQ9BVS5 477 aaKnown RBP1.21□□□□□ -2.22
LMBR1-222ENST00000638959 SLAMF7Q9NQ25 335 aa1.21□□□□□ -2.22
LMBR1-222ENST00000638959 RLIMQ9NVW2 624 aa1.21□□□□□ -2.22
LMBR1-222ENST00000638959 CFAP97Q9P2B7 532 aa1.21□□□□□ -2.22
LMBR1-222ENST00000638959 LPAR3Q9UBY5 353 aa1.21□□□□□ -2.22
LMBR1-222ENST00000638959 TRBV5-3A0A0A0MS03 114 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 A0A0G2JK05 382 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 KRTAP4-16G5E9R7 235 aaPredicted RBP1.2□□□□□ -2.22
LMBR1-222ENST00000638959 ATG13O75143 517 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 MYF6P23409 242 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 PDE6CP51160 858 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 SLC5A3P53794 718 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 LILRA4P59901 499 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 IRX6P78412 446 aaPredicted RBP1.2□□□□□ -2.22
LMBR1-222ENST00000638959 SRSF2Q01130 221 aaKnown RBP1.2□□□□□ -2.22
LMBR1-222ENST00000638959 KCNJ12Q14500 433 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 LPAL2Q16609 132 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 PFKFB3Q16875 520 aaPredicted RBP1.2□□□□□ -2.22
LMBR1-222ENST00000638959 FAM110CQ1W6H9 321 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 ATP13A4Q4VNC1 1196 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 DCAF12L1Q5VU92 463 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 DENND2CQ68D51 928 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 SPINK14Q6IE38 97 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 GTSCR1Q86UQ5 136 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 LINC01465Q8N7H1 131 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 FAM46DQ8NEK8 389 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 OR2W6PQ8NHA6 318 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 OSCP1Q8WVF1 389 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 IGSF21Q96ID5 467 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 GMLQ99445 158 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 PKP4Q99569 1192 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 EGFL8Q99944 293 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 ABHD16BQ9H3Z7 469 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 PIF1Q9H611 641 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 GPR35Q9HC97 309 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 PAPOLBQ9NRJ5 636 aaKnown RBP1.2□□□□□ -2.22
LMBR1-222ENST00000638959 SNX15Q9NRS6 342 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 SNTG2Q9NY99 539 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 INTUQ9ULD6 942 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 DTX4Q9Y2E6 619 aa1.2□□□□□ -2.22
LMBR1-222ENST00000638959 CLEC18AA5D8T8 446 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 OR6C75A6NL08 312 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 ARIH2O95376 493 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 ATXN1LP0C7T5 689 aaKnown RBP1.19□□□□□ -2.22
LMBR1-222ENST00000638959 PDIA4P13667 645 aaKnown RBP1.19□□□□□ -2.22
LMBR1-222ENST00000638959 OSMP13725 252 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 ANOS1P23352 680 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 PHKA1P46020 1223 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 SLC12A2P55011 1212 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 ST3GAL1Q11201 340 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 TCF15Q12870 199 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 PABPC4Q13310 644 aaKnown RBP eCLIP1.19□□□□□ -2.22
LMBR1-222ENST00000638959 DMP1Q13316 513 aaPredicted RBP1.19□□□□□ -2.22
LMBR1-222ENST00000638959 RAB39AQ14964 217 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 KPNB1Q14974 876 aaKnown RBP1.19□□□□□ -2.22
LMBR1-222ENST00000638959 MFSD13AQ14CX5 517 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 SLC39A14Q15043 492 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 ZNF239Q16600 458 aaKnown RBP1.19□□□□□ -2.22
LMBR1-222ENST00000638959 ZNF484Q5JVG2 852 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 MIGA2Q7L4E1 593 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 KLHDC8BQ8IXV7 354 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 ADGRF4Q8IZF3 695 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 CLEC18CQ8NCF0 446 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 ELOVL1Q9BW60 279 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 TM2D2Q9BX73 214 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 DDX31Q9H8H2 851 aaKnown RBP1.19□□□□□ -2.22
LMBR1-222ENST00000638959 DNAJB11Q9UBS4 358 aa1.19□□□□□ -2.22
LMBR1-222ENST00000638959 NDRG4Q9ULP0 352 aaKnown RBP1.19□□□□□ -2.22
LMBR1-222ENST00000638959 COL4A4P53420 1690 aaPredicted RBP1.19□□□□□ -2.22
LMBR1-222ENST00000638959 TRIOBPQ9H2D6 2365 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 SLC22A23A1A5C7 686 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 GOLGA8AA7E2F4 631 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 PSMD9O00233 223 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 CLIC1O00299 241 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 DCLK1O15075 740 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 KCNQ3O43525 872 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 UGDHO60701 494 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 RARBP10826 455 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 ATF7P17544 494 aaPredicted RBP1.18□□□□□ -2.22
LMBR1-222ENST00000638959 POU3F2P20265 443 aaPredicted RBP1.18□□□□□ -2.22
LMBR1-222ENST00000638959 ADORA2AP29274 412 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 GKP32189 559 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 DIO1P49895 249 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 SEC61A1P61619 476 aaKnown RBP1.18□□□□□ -2.22
LMBR1-222ENST00000638959 TLE1Q04724 770 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 MLC1Q15049 377 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 PCBP1Q15365 356 aaKnown RBP eCLIP1.18□□□□□ -2.22
LMBR1-222ENST00000638959 LY6KQ17RY6 165 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 KRTAP21-2Q3LI59 83 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 LONRF3Q496Y0 759 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 FAM160B1Q5W0V3 765 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 PP632Q6XCG6 107 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 PTCHD4Q6ZW05 846 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 USP37Q86T82 979 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 CLRN3Q8NCR9 226 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 MAPK1IP1LQ8NDC0 245 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 NRG4Q8WWG1 115 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms