RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	MTF1	Q14872	753 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	FILIP1L	Q4L180	1135 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	USP39	Q53GS9	565 aa	Known RBP	10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	CDKAL1	Q5VV42	579 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TDRD10	Q5VZ19	366 aa	Known RBP	10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	PMS2CL	Q68D20	193 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	DPH6	Q7L8W6	267 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	MON1A	Q86VX9	555 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	DCP1B	Q8IZD4	617 aa	Known RBP	10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TSTD1	Q8NFU3	115 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	SPATA18	Q8TC71	538 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	PLEKHO2	Q8TD55	490 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	OSCP1	Q8WVF1	389 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	ZNF516	Q92618	1163 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	EZH1	Q92800	747 aa	Predicted RBP	10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	ATP2A3	Q93084	1043 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	HPDL	Q96IR7	371 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	PI4K2A	Q9BTU6	479 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TPSD1	Q9BZJ3	242 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	DNAI2	Q9GZS0	605 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	MMRN2	Q9H8L6	949 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	CBX8	Q9HC52	389 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TMEM9B	Q9NQ34	198 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	DUS2	Q9NX74	493 aa	Known RBP	10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	PCDHB5	Q9Y5E4	795 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	ZNF638	Q14966	1978 aa	Known RBP	10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	CHD6	Q8TD26	2715 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	CACNA1G	O43497	2377 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	PTPRJ	Q12913	1337 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	LAMA1	P25391	3075 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	GTPBP10	A4D1E9	387 aa	Known RBP	10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	PATE3	B3GLJ2	98 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	PES1	O00541	588 aa	Known RBP	10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	CDX4	O14627	284 aa	Predicted RBP	10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TADA3	O75528	432 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	HLA-DRA	P01903	254 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	FAM163B	P0C2L3	166 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	CSRP1	P21291	193 aa	Known RBP	10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	IFNAR2	P48551	515 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TNNC1	P63316	161 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	MYL7	Q01449	175 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	PPP3CA	Q08209	521 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	NCAPH	Q15003	741 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	IQCB1	Q15051	598 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	ZNF699	Q32M78	642 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	UAP1L1	Q3KQV9	507 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	ZNF667	Q5HYK9	610 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	C1orf220	Q5T0J3	134 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	FKBP15	Q5T1M5	1219 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	SDHAF4	Q5VUM1	108 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	CYP2U1	Q7Z449	544 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	C11orf74	Q86VG3	221 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	IRF2BP1	Q8IU81	584 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	DHX40	Q8IX18	779 aa	Known RBP	10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TMEM86A	Q8N2M4	240 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TTC39C	Q8N584	583 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	GATA6	Q92908	595 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	FAM81B	Q96LP2	452 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	SCNM1	Q9BWG6	230 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	NDST4	Q9H3R1	872 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	FAM124B	Q9H5Z6	455 aa	Predicted RBP	10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	VRTN	Q9H8Y1	702 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TRPC7	Q9HCX4	862 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TMLHE	Q9NVH6	421 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	RAB20	Q9NX57	234 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	GDAP2	Q9NXN4	497 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	UXT	Q9UBK9	157 aa	Predicted RBP	10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	SIX4	Q9UIU6	781 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	COQ4	Q9Y3A0	265 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	WNT6	Q9Y6F9	365 aa		10.05	□□□□□ -0.8
CACNA1A-256	ENST00000637981	PTPRD	P23468	1912 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	MYO16	Q9Y6X6	1858 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	ASPM	Q8IZT6	3477 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	KIAA1549L	Q6ZVL6	1849 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	LRRC10B	A6NIK2	292 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	SRRM3	A6NNA2	597 aa	Predicted RBP	10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	CST3	P01034	146 aa	Predicted RBP	10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	CKM	P06732	381 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TPM3	P06753	285 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	USP17L7	P0C7H9	530 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	ZNF18	P17022	549 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	BCKDHB	P21953	392 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	DHPS	P49366	369 aa	Predicted RBP	10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	SEC13	P55735	322 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	MYL6	P60660	151 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	IRX4	P78413	519 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TSPY1	Q01534	308 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	USP4	Q13107	963 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	NR1H3	Q13133	447 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	KRT31	Q15323	416 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	ZNF77	Q15935	545 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	NFE2	Q16621	373 aa	Predicted RBP	10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	DDR2	Q16832	855 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	EML3	Q32P44	896 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	WDR72	Q3MJ13	1102 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	VWA3B	Q502W6	1294 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	HSP90AA4P	Q58FG1	418 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	ANO7	Q6IWH7	933 aa		10.04	□□□□□ -0.8
CACNA1A-256	ENST00000637981	GBP6	Q6ZN66	633 aa		10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms