RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 ZNF669Q96BR6 464 aaPredicted RBP17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 SEPHS2Q99611 448 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 C6orf62Q9GZU0 229 aaPredicted RBP17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 VTA1Q9NP79 307 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 ANGPT4Q9Y264 503 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 RPAP1Q9BWH6 1393 aaPredicted RBP17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 A0A1B0GW55 424 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 TBKBP1A7MCY6 615 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 ERN1O75460 977 aaKnown RBP17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 ALBP02768 609 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 POLBP06746 335 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 DUX4L2P0CJ85 424 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 DUX4L3P0CJ86 424 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 DUX4L4P0CJ87 422 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 DUX4L5P0CJ88 424 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 DUX4L6P0CJ89 424 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 DUX4L7P0CJ90 424 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 RGS2P41220 211 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 CPT1AP50416 773 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 GALCP54803 685 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 PRR5LQ6MZQ0 368 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 SCAIQ8N9R8 606 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 SEPT1Q8WYJ6 367 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 ATG4CQ96DT6 458 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 WDR24Q96S15 920 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 NUDT12Q9BQG2 462 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 NT5C1AQ9BXI3 368 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 CERS4Q9HA82 394 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 DUX4Q9UBX2 424 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 CPA4Q9UI42 421 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 KLRK1P26718 216 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 ZNF543Q08ER8 600 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 CCSER1Q9C0I3 900 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 TLR8Q9NR97 1041 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 LRRIQ3A6PVS8 624 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 ATP8B1O43520 1251 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 CCDC130P13994 396 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 TMED10P49755 219 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 POU5F1Q01860 360 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 CDH2P19022 906 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 TARSP26639 723 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 EPHB2P29323 1055 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 ARL3P36405 182 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 TRIP10Q15642 601 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 SGSM1Q2NKQ1 1148 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 KCNT1Q5JUK3 1230 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 METTL16Q86W50 562 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 ZNF200P98182 395 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 TCEAL5Q5H9L2 206 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 MKNK1Q9BUB5 465 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 GPRC5DQ9NZD1 345 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 RAB23Q9ULC3 237 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 HPS5Q9UPZ3 1129 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 SNPHO15079 494 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 KCNV1Q6PIU1 500 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 PALB2Q86YC2 1186 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 PHF21BQ96EK2 531 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 ATP6V1G3Q96LB4 118 aa17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 POP1Q99575 1024 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-253ENST00000637927 CFAP99D6REC4 459 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 F5H5T6 163 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 TRDMT1O14717 391 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 GPD1P21695 349 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 XKR3Q5GH77 459 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 DNAJC14Q6Y2X3 702 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 GALNTL5Q7Z4T8 443 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 NT5MQ9NPB1 228 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 PCDHB9Q9Y5E1 797 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 PTPN1P18031 435 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 ACAT1P24752 427 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 PTPN20Q4JDL3 420 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 TTC33Q6PID6 262 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 FAM20CQ8IXL6 584 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 STK33Q9BYT3 514 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 DEFB129Q9H1M3 183 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 NRG3P56975 720 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 ATG16L2Q8NAA4 619 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 ATL2Q8NHH9 583 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 SLITRK1Q96PX8 696 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 RBM15Q96T37 977 aaKnown RBP eCLIP17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 IPPQ9Y573 584 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 B3GAT3O94766 335 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 NR3C2P08235 984 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 KYAT1Q16773 422 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 TTC37Q6PGP7 1564 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 RNF180Q86T96 592 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 RTL3Q8N8U3 475 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 TMCC3Q9ULS5 477 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 OVOS2A0A0G2JMS6 1433 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 OVOS2A0A0J9YW53 1432 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 OVOS2Q6IE36 1432 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 SOX10P56693 466 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 MYBPC1Q00872 1141 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 GRIK3Q13003 919 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 ENOSF1Q7L5Y1 443 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 GRIN3AQ8TCU5 1115 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 TSPAN17Q96FV3 270 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 FBXO28Q9NVF7 368 aa17.5■□□□□ 0.39
CACNA1A-253ENST00000637927 MAT2BQ9NZL9 334 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms