RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 RFFLQ8WZ73 363 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 VCPIP1Q96JH7 1222 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 CFAP57Q96MR6 1250 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 SELENOOQ9BVL4 669 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 STK39Q9UEW8 545 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 ANAPC7Q9UJX3 599 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 NAALADL1Q9UQQ1 740 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 A0A1W2PPC1 479 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 GRID2IPA4D2P6 1211 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 TMEM191CA6NGB0 347 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 SIGLEC16A6NMB1 481 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 ZSCAN12O43309 604 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 NCK2O43639 380 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 TADA3O75528 432 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 TBX18O95935 607 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 KRT3P12035 628 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 CCR2P41597 374 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 ALDH1A3P47895 512 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 TUFMP49411 452 aaKnown RBP11.18□□□□□ -0.62
CLN5-213ENST00000636681 NAP1L1P55209 391 aaKnown RBP11.18□□□□□ -0.62
CLN5-213ENST00000636681 RPL10AP62906 217 aaKnown RBP11.18□□□□□ -0.62
CLN5-213ENST00000636681 DLX2Q07687 328 aaPredicted RBP11.18□□□□□ -0.62
CLN5-213ENST00000636681 SMARCB1Q12824 385 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 KCNC3Q14003 757 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 MESDQ14696 234 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 OTUD1Q5VV17 481 aaPredicted RBP11.18□□□□□ -0.62
CLN5-213ENST00000636681 PM20D1Q6GTS8 502 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 TMEM150AQ86TG1 271 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 DEFB106AQ8N104 65 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 ARFGAP1Q8N6T3 406 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 TPCN2Q8NHX9 752 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 RXFP2Q8WXD0 754 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 FBXO32Q969P5 355 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 SPATA17Q96L03 361 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 WDR24Q96S15 920 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 MAGEB5Q9BZ81 275 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 UBXN6Q9BZV1 441 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 AVENQ9NQS1 362 aaPredicted RBP11.18□□□□□ -0.62
CLN5-213ENST00000636681 IL37Q9NZH6 218 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 INTUQ9ULD6 942 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 PACSIN2Q9UNF0 486 aaPredicted RBP11.18□□□□□ -0.62
CLN5-213ENST00000636681 MTCH2Q9Y6C9 303 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 SYNJ2BP-COX16A0A087WUM0 186 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 PALMO75781 387 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 FTCDO95954 541 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 IGFBP4P22692 258 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 YWHAQP27348 245 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 ACADSBP45954 432 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 ATP11AP98196 1134 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 CDO1Q16878 200 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 PPM1LQ5SGD2 360 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 STXBP5Q5T5C0 1151 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 BSPRYQ5W0U4 402 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 TMC5Q6UXY8 1006 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 SLC35F6Q8N357 371 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 ZNF707Q96C28 371 aaPredicted RBP11.17□□□□□ -0.62
CLN5-213ENST00000636681 TCEAL4Q96EI5 215 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 C16orf45Q96MC5 204 aaPredicted RBP11.17□□□□□ -0.62
CLN5-213ENST00000636681 LRRC3Q9BY71 257 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 LMAN2LQ9H0V9 348 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 CCSER2Q9H7U1 834 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 IL21Q9HBE4 155 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 PNPLA8Q9NP80 782 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 CNGB3Q9NQW8 809 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 TMPRSS4Q9NRS4 437 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 PARVAQ9NVD7 372 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 COX16Q9P0S2 106 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 DOCK8Q8NF50 2099 aa11.17□□□□□ -0.62
CLN5-213ENST00000636681 HELZP42694 1942 aaKnown RBP11.17□□□□□ -0.62
CLN5-213ENST00000636681 C2CD4BA6NLJ0 364 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 CCP110O43303 1012 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 KRT86O43790 486 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 ZMYND10O75800 440 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 LRG1P02750 347 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 LTFP02788 710 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 MYBL1P10243 752 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 TNNT1P13805 278 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 GSCP56915 257 aaPredicted RBP11.16□□□□□ -0.62
CLN5-213ENST00000636681 YWHAGP61981 247 aaKnown RBP eCLIP11.16□□□□□ -0.62
CLN5-213ENST00000636681 CYP4F8P98187 520 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 CCDC14Q49A88 953 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 DCAF6Q58WW2 860 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 ZNF569Q5MCW4 686 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 TXNRD3NBQ6F5E7 133 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 PDE12Q6L8Q7 609 aaKnown RBP11.16□□□□□ -0.62
CLN5-213ENST00000636681 DCUN1D2Q6PH85 259 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 GAREM2Q75VX8 874 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 SLC26A9Q7LBE3 791 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 TMC8Q8IU68 726 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 LRRC57Q8N9N7 239 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 MSANTD4Q8NCY6 345 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 ST13P5Q8NFI4 369 aaPredicted RBP11.16□□□□□ -0.62
CLN5-213ENST00000636681 SLC22A12Q96S37 553 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 TBCBQ99426 244 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 CORO1BQ9BR76 489 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 CYLDQ9NQC7 956 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 KCND1Q9NSA2 647 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 DNMT3BQ9UBC3 853 aaKnown RBP11.16□□□□□ -0.62
CLN5-213ENST00000636681 SFMBT1Q9UHJ3 866 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 STRIP2Q9ULQ0 834 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms