RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 ALG13Q9NP73 1137 aaKnown RBP15.14■□□□□ 0.01
CLN6-215ENST00000636674 HOXC10Q9NYD6 342 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 STX18Q9P2W9 335 aaKnown RBP15.14■□□□□ 0.01
CLN6-215ENST00000636674 SIX4Q9UIU6 781 aa15.14■□□□□ 0.01
CLN6-215ENST00000636674 ZSWIM8A7E2V4 1837 aa15.13■□□□□ 0.01
CLN6-215ENST00000636674 CAPN14A8MX76 684 aa15.13■□□□□ 0.01
CLN6-215ENST00000636674 ACKR2O00590 384 aa15.13■□□□□ 0.01
CLN6-215ENST00000636674 CILPO75339 1184 aa15.13■□□□□ 0.01
CLN6-215ENST00000636674 MICAL2O94851 1124 aa15.13■□□□□ 0.01
CLN6-215ENST00000636674 NPTXRO95502 500 aa15.13■□□□□ 0.01
CLN6-215ENST00000636674 HMGCRP04035 888 aa15.13■□□□□ 0.01
CLN6-215ENST00000636674 ESRRAP11474 423 aaPredicted RBP15.13■□□□□ 0.01
CLN6-215ENST00000636674 RAP1GAPP47736 663 aa15.13■□□□□ 0.01
CLN6-215ENST00000636674 SLC34A1Q06495 639 aa15.13■□□□□ 0.01
CLN6-215ENST00000636674 FSTL1Q12841 308 aa15.13■□□□□ 0.01
CLN6-215ENST00000636674 KPNB1Q14974 876 aaKnown RBP15.13■□□□□ 0.01
CLN6-215ENST00000636674 VPS52Q8N1B4 723 aa15.13■□□□□ 0.01
CLN6-215ENST00000636674 TAB3Q8N5C8 712 aaPredicted RBP15.13■□□□□ 0.01
CLN6-215ENST00000636674 FAF2Q96CS3 445 aa15.13■□□□□ 0.01
CLN6-215ENST00000636674 SIRPGQ9P1W8 387 aa15.13■□□□□ 0.01
CLN6-215ENST00000636674 NXF1Q9UBU9 619 aaKnown RBP15.13■□□□□ 0.01
CLN6-215ENST00000636674 PLLPQ9Y342 182 aa15.13■□□□□ 0.01
CLN6-215ENST00000636674 TRIM49D1C9J1S8 452 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 F8W8V4 182 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 I3L4J1 428 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 GPD1P21695 349 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 TGM2P21980 687 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 GPD2P43304 727 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 CCNHP51946 323 aaPredicted RBP15.12■□□□□ 0.01
CLN6-215ENST00000636674 CDH6P55285 790 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 MTM1Q13496 603 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 CCDC6Q16204 474 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 LGSNQ5TDP6 509 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 SNX30Q5VWJ9 437 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 ATG16L1Q676U5 607 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 METTL7BQ6UX53 244 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 NPNTQ6UXI9 565 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 CDHR3Q6ZTQ4 885 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 PRPF39Q86UA1 669 aaKnown RBP15.12■□□□□ 0.01
CLN6-215ENST00000636674 RNF149Q8NC42 400 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 SEPT1Q8WYJ6 367 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 MTBPQ96DY7 904 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 RNF157Q96PX1 679 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 WRNIP1Q96S55 665 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 ADPGKQ9BRR6 497 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 ELOVL4Q9GZR5 314 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 IQCGQ9H095 443 aaKnown RBP15.12■□□□□ 0.01
CLN6-215ENST00000636674 FZD8Q9H461 694 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 FAM124BQ9H5Z6 455 aaPredicted RBP15.12■□□□□ 0.01
CLN6-215ENST00000636674 CYP3A43Q9HB55 503 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.12■□□□□ 0.01
CLN6-215ENST00000636674 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.12■□□□□ 0.01
CLN6-215ENST00000636674 ZNF212Q9UDV6 495 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 HACL1Q9UJ83 578 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 C2CD4BA6NLJ0 364 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 E5RJQ4 531 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 PPP1R12AO14974 1030 aaPredicted RBP15.12■□□□□ 0.01
CLN6-215ENST00000636674 KRT36O76013 467 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 TGFB3P10600 412 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 NEFHP12036 1026 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 TCF7P36402 384 aaPredicted RBP15.12■□□□□ 0.01
CLN6-215ENST00000636674 NRLP54845 237 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 MMRN1Q13201 1228 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 PDK2Q15119 407 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 ZRSR2Q15696 482 aaKnown RBP15.12■□□□□ 0.01
CLN6-215ENST00000636674 TBCCQ15814 346 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 DBN1Q16643 649 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 TEX44Q53QW1 395 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 ATF7IP2Q5U623 682 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 LRRC74BQ6ZQY2 392 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 TTC7BQ86TV6 843 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 MCUQ8NE86 351 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 TMEM176AQ96HP8 235 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 TWNKQ96RR1 684 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 NMUR2Q9GZQ4 415 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 RRAGCQ9HB90 399 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 PLAC1Q9HBJ0 212 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 RAB6BQ9NRW1 208 aa15.12■□□□□ 0.01
CLN6-215ENST00000636674 BCLAF3A2AJT9 711 aaKnown RBP15.11■□□□□ 0.01
CLN6-215ENST00000636674 DPPA5A6NC42 116 aa15.11■□□□□ 0.01
CLN6-215ENST00000636674 ZBTB42B2RXF5 422 aa15.11■□□□□ 0.01
CLN6-215ENST00000636674 RFPL1O75677 317 aa15.11■□□□□ 0.01
CLN6-215ENST00000636674 DDNO94850 711 aaPredicted RBP15.11■□□□□ 0.01
CLN6-215ENST00000636674 VDRP11473 427 aa15.11■□□□□ 0.01
CLN6-215ENST00000636674 ATICP31939 592 aa15.11■□□□□ 0.01
CLN6-215ENST00000636674 MAGEA3P43357 314 aa15.11■□□□□ 0.01
CLN6-215ENST00000636674 HIRAP54198 1017 aaPredicted RBP15.11■□□□□ 0.01
CLN6-215ENST00000636674 MRPS5P82675 430 aaKnown RBP15.11■□□□□ 0.01
CLN6-215ENST00000636674 FAM102AQ5T9C2 384 aaPredicted RBP15.11■□□□□ 0.01
CLN6-215ENST00000636674 C4orf22Q6V702 233 aa15.11■□□□□ 0.01
CLN6-215ENST00000636674 ZC3H18Q86VM9 953 aaKnown RBP15.11■□□□□ 0.01
CLN6-215ENST00000636674 TMPRSS6Q8IU80 811 aa15.11■□□□□ 0.01
CLN6-215ENST00000636674 C1orf127Q8N9H9 656 aa15.11■□□□□ 0.01
CLN6-215ENST00000636674 CXorf38Q8TB03 319 aa15.11■□□□□ 0.01
CLN6-215ENST00000636674 TEKT4Q8WW24 435 aa15.11■□□□□ 0.01
CLN6-215ENST00000636674 NRG4Q8WWG1 115 aa15.11■□□□□ 0.01
CLN6-215ENST00000636674 MIS12Q9H081 205 aa15.11■□□□□ 0.01
CLN6-215ENST00000636674 WWP1Q9H0M0 922 aa15.11■□□□□ 0.01
CLN6-215ENST00000636674 SMYD3Q9H7B4 428 aa15.11■□□□□ 0.01
CLN6-215ENST00000636674 AFG3L2Q9Y4W6 797 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms